Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
RXRBP28702 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
RXRBP28702 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.67□□□□□ -1.02
RXRBP28702 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
RXRBP28702 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.67□□□□□ -1.02
RXRBP28702 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 RPS7P12-201ENST00000422385 582 ntBASIC8.67□□□□□ -1.02
RXRBP28702 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 HMGN1P5-201ENST00000448591 263 ntBASIC8.67□□□□□ -1.02
RXRBP28702 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 AC005412.2-201ENST00000492004 341 ntBASIC8.67□□□□□ -1.02
RXRBP28702 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC8.67□□□□□ -1.02
RXRBP28702 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.67□□□□□ -1.02
RXRBP28702 ELOCP28-201ENST00000590044 317 ntBASIC8.67□□□□□ -1.02
RXRBP28702 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.67□□□□□ -1.02
RXRBP28702 CR382285.1-202ENST00000604687 547 ntBASIC8.67□□□□□ -1.02
RXRBP28702 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.67□□□□□ -1.02
RXRBP28702 AL355493.4-201ENST00000618530 292 ntBASIC8.67□□□□□ -1.02
RXRBP28702 AC120338.1-201ENST00000625074 1541 ntBASIC8.67□□□□□ -1.02
RXRBP28702 AC087269.2-201ENST00000641764 975 ntBASIC8.67□□□□□ -1.02
RXRBP28702 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 OR13C1P-202ENST00000641378 2919 ntBASIC8.67□□□□□ -1.02
RXRBP28702 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 AC131649.2-201ENST00000624925 4439 ntBASIC8.66□□□□□ -1.02
RXRBP28702 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 USP9YP3-201ENST00000434481 1766 ntBASIC8.66□□□□□ -1.02
RXRBP28702 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.66□□□□□ -1.02
RXRBP28702 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
RXRBP28702 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 XKRY2-202ENST00000623874 1581 ntBASIC8.66□□□□□ -1.02
RXRBP28702 XKRY-202ENST00000624960 1581 ntBASIC8.66□□□□□ -1.02
RXRBP28702 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
RXRBP28702 AC106872.5-201ENST00000508856 1416 ntBASIC8.66□□□□□ -1.02
RXRBP28702 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 AC005005.2-201ENST00000420779 380 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC8.66□□□□□ -1.02
RXRBP28702 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.66□□□□□ -1.02
RXRBP28702 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC8.66□□□□□ -1.02
RXRBP28702 CBX1P2-201ENST00000453841 458 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC8.66□□□□□ -1.02
RXRBP28702 AC093763.2-201ENST00000505334 1223 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC8.66□□□□□ -1.02
RXRBP28702 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC8.66□□□□□ -1.02
RXRBP28702 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.66□□□□□ -1.02
RXRBP28702 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 AC112673.1-201ENST00000513168 575 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC110056.1-201ENST00000525759 911 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC8.66□□□□□ -1.02
RXRBP28702 UBTFL10-201ENST00000528532 562 ntBASIC8.66□□□□□ -1.02
RXRBP28702 OR10G5P-201ENST00000532733 358 ntBASIC8.66□□□□□ -1.02
RXRBP28702 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 GLUD1P2-201ENST00000583339 201 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC015726.1-201ENST00000602353 681 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC023762.1-201ENST00000603280 584 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AL139041.1-201ENST00000605480 610 ntBASIC8.66□□□□□ -1.02
RXRBP28702 MIR6085-201ENST00000618314 110 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AL731566.2-201ENST00000618971 317 ntBASIC8.66□□□□□ -1.02
RXRBP28702 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC8.66□□□□□ -1.02
RXRBP28702 MIR6810-201ENST00000622701 70 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC073342.3-201ENST00000624211 193 ntBASIC8.66□□□□□ -1.02
RXRBP28702 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.66□□□□□ -1.02
RXRBP28702 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
RXRBP28702 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RXRBP28702 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.65□□□□□ -1.02
RXRBP28702 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RXRBP28702 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.65□□□□□ -1.02
RXRBP28702 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms