Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH3P22223 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH3P22223 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH3P22223 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH3P22223 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH3P22223 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH3P22223 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH3P22223 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH3P22223 AC107993.1-201ENST00000591343 684 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AC004805.3-201ENST00000603178 310 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AC009779.8-202ENST00000607990 932 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AC012676.3-201ENST00000614983 479 ntBASIC6.31□□□□□ -1.4
CDH3P22223 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 AL442128.2-201ENST00000620246 1824 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 AC005702.3-201ENST00000585345 1447 ntBASIC6.31□□□□□ -1.4
CDH3P22223 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDH3P22223 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH3P22223 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH3P22223 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CDH3P22223 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 AC090181.3-201ENST00000624777 1514 ntBASIC6.3□□□□□ -1.4
CDH3P22223 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
CDH3P22223 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH3P22223 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH3P22223 YWHAZP4-201ENST00000392459 708 ntBASIC6.3□□□□□ -1.4
CDH3P22223 RPL5P20-201ENST00000403848 896 ntBASIC6.3□□□□□ -1.4
CDH3P22223 AC099535.1-201ENST00000408928 371 ntBASIC6.3□□□□□ -1.4
CDH3P22223 MRPS21P5-201ENST00000417885 231 ntBASIC6.3□□□□□ -1.4
CDH3P22223 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH3P22223 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 RN7SL741P-201ENST00000482473 289 ntBASIC6.3□□□□□ -1.4
CDH3P22223 RPS27P20-201ENST00000492051 246 ntBASIC6.3□□□□□ -1.4
CDH3P22223 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 SCARNA5-201ENST00000516201 276 ntBASIC6.3□□□□□ -1.4
CDH3P22223 RN7SKP183-201ENST00000517169 324 ntBASIC6.3□□□□□ -1.4
CDH3P22223 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH3P22223 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 AC121758.1-202ENST00000556917 658 ntBASIC6.3□□□□□ -1.4
CDH3P22223 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 AC063977.7-201ENST00000594454 337 ntBASIC6.3□□□□□ -1.4
CDH3P22223 BUB1P1-201ENST00000603541 607 ntBASIC6.3□□□□□ -1.4
CDH3P22223 WBP1LP12-201ENST00000604449 331 ntBASIC6.3□□□□□ -1.4
CDH3P22223 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 AL445647.2-201ENST00000615170 130 ntBASIC6.3□□□□□ -1.4
CDH3P22223 OR1N1-202ENST00000619659 939 ntBASIC6.3□□□□□ -1.4
CDH3P22223 AL512356.3-201ENST00000623005 461 ntBASIC6.3□□□□□ -1.4
CDH3P22223 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.3□□□□□ -1.4
CDH3P22223 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH3P22223 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
CDH3P22223 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH3P22223 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH3P22223 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH3P22223 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.3□□□□□ -1.4
CDH3P22223 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH3P22223 AC007485.2-201ENST00000623493 1667 ntBASIC6.3□□□□□ -1.4
CDH3P22223 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CDH3P22223 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH3P22223 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CDH3P22223 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 AP002370.1-201ENST00000528055 1602 ntBASIC6.29□□□□□ -1.4
CDH3P22223 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 AL359885.1-201ENST00000415786 903 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AL713922.1-201ENST00000416477 747 ntBASIC6.29□□□□□ -1.4
CDH3P22223 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDH3P22223 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH3P22223 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH3P22223 AC019084.1-201ENST00000457337 432 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms