Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 SMG1P7-201ENST00000565246 2704 ntBASIC6.59□□□□□ -1.35
ATF4P18848 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
ATF4P18848 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
ATF4P18848 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
ATF4P18848 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
ATF4P18848 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 AC011477.1-204ENST00000623416 1325 ntBASIC6.58□□□□□ -1.36
ATF4P18848 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 MAPK10-383ENST00000642032 3390 ntBASIC6.58□□□□□ -1.36
ATF4P18848 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATF4P18848 RNU12-2P-201ENST00000364789 156 ntBASIC6.58□□□□□ -1.36
ATF4P18848 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATF4P18848 AL590617.1-201ENST00000405630 748 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 MRPS21P3-201ENST00000436696 262 ntBASIC6.58□□□□□ -1.36
ATF4P18848 VN1R110P-201ENST00000438988 971 ntBASIC6.58□□□□□ -1.36
ATF4P18848 TXNP5-201ENST00000441043 315 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 RBM22P5-201ENST00000449536 1277 ntBASIC6.58□□□□□ -1.36
ATF4P18848 RPL12P26-201ENST00000452430 487 ntBASIC6.58□□□□□ -1.36
ATF4P18848 RPL7AP52-201ENST00000458096 790 ntBASIC6.58□□□□□ -1.36
ATF4P18848 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC015724.1-201ENST00000478577 156 ntBASIC6.58□□□□□ -1.36
ATF4P18848 OR9A3P-202ENST00000485185 878 ntBASIC6.58□□□□□ -1.36
ATF4P18848 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC147055.4-201ENST00000504399 745 ntBASIC6.58□□□□□ -1.36
ATF4P18848 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 SSR2-215ENST00000529008 849 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 EIF4A2P5-201ENST00000529914 499 ntBASIC6.58□□□□□ -1.36
ATF4P18848 NANOGNBP2-201ENST00000544753 553 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AC027667.1-201ENST00000545814 304 ntBASIC6.58□□□□□ -1.36
ATF4P18848 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 PDLIM1P3-201ENST00000582370 599 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC6.58□□□□□ -1.36
ATF4P18848 AC008592.5-201ENST00000607856 547 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AC013562.2-201ENST00000611632 603 ntBASIC6.58□□□□□ -1.36
ATF4P18848 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 AL445670.1-201ENST00000618889 801 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AL451054.1-201ENST00000621770 772 ntBASIC6.58□□□□□ -1.36
ATF4P18848 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.58□□□□□ -1.36
ATF4P18848 AL109806.1-201ENST00000623967 1248 ntBASIC6.58□□□□□ -1.36
ATF4P18848 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.58□□□□□ -1.36
ATF4P18848 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 AL596244.1-201ENST00000567068 3779 ntBASIC6.58□□□□□ -1.36
ATF4P18848 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
ATF4P18848 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ATF4P18848 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 MAPK10-261ENST00000641050 3109 ntBASIC6.58□□□□□ -1.36
ATF4P18848 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 ADAM20P3-201ENST00000508710 2106 ntBASIC6.58□□□□□ -1.36
ATF4P18848 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATF4P18848 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
ATF4P18848 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.57□□□□□ -1.36
ATF4P18848 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATF4P18848 AC079316.2-201ENST00000623545 1375 ntBASIC6.57□□□□□ -1.36
ATF4P18848 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms