Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CASC19-260ENST00000641828 2001 ntBASIC6.84□□□□□ -1.31
TPM1P09493 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM1P09493 AC006600.2-201ENST00000624834 2506 ntBASIC6.84□□□□□ -1.31
TPM1P09493 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
TPM1P09493 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.84□□□□□ -1.32
TPM1P09493 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TPM1P09493 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.84□□□□□ -1.32
TPM1P09493 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
TPM1P09493 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.84□□□□□ -1.32
TPM1P09493 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
TPM1P09493 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 RPL31P11-201ENST00000426558 1558 ntBASIC6.83□□□□□ -1.32
TPM1P09493 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 AL121768.1-201ENST00000613917 2544 ntBASIC6.83□□□□□ -1.32
TPM1P09493 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 MIR133A2-201ENST00000347538 102 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AC019178.1-201ENST00000392337 440 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AC024937.2-201ENST00000411669 1242 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AL589794.1-201ENST00000424971 390 ntBASIC6.83□□□□□ -1.32
TPM1P09493 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM1P09493 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM1P09493 AC022080.2-201ENST00000452932 533 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 RN7SKP198-201ENST00000459286 306 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AC137549.1-201ENST00000514243 533 ntBASIC6.83□□□□□ -1.32
TPM1P09493 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TPM1P09493 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 AC009729.1-201ENST00000548873 1133 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM1P09493 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 AC114477.1-201ENST00000605097 605 ntBASIC6.83□□□□□ -1.32
TPM1P09493 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM1P09493 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 MIR6807-201ENST00000621968 92 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AL359091.1-201ENST00000449048 1734 ntBASIC6.83□□□□□ -1.32
TPM1P09493 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM1P09493 AL353743.3-201ENST00000442109 1468 ntBASIC6.83□□□□□ -1.32
TPM1P09493 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM1P09493 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TPM1P09493 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 AC024651.2-201ENST00000562480 2098 ntBASIC6.83□□□□□ -1.32
TPM1P09493 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM1P09493 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM1P09493 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.82□□□□□ -1.32
TPM1P09493 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
TPM1P09493 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
TPM1P09493 RPL18AP14-201ENST00000417685 526 ntBASIC6.82□□□□□ -1.32
TPM1P09493 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.82□□□□□ -1.32
TPM1P09493 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.82□□□□□ -1.32
TPM1P09493 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.82□□□□□ -1.32
TPM1P09493 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.82□□□□□ -1.32
TPM1P09493 TPRX1P1-201ENST00000557620 319 ntBASIC6.82□□□□□ -1.32
TPM1P09493 MIR4258-201ENST00000580920 91 ntBASIC6.82□□□□□ -1.32
TPM1P09493 AL589863.1-201ENST00000595383 631 ntBASIC6.82□□□□□ -1.32
TPM1P09493 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.82□□□□□ -1.32
TPM1P09493 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.82□□□□□ -1.32
TPM1P09493 MIR6732-201ENST00000619365 60 ntBASIC6.82□□□□□ -1.32
TPM1P09493 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM1P09493 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM1P09493 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
TPM1P09493 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM1P09493 AC092451.3-201ENST00000625067 1343 ntBASIC6.81□□□□□ -1.32
TPM1P09493 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
TPM1P09493 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM1P09493 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.81□□□□□ -1.32
TPM1P09493 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM1P09493 RN7SKP191-201ENST00000364713 306 ntBASIC6.81□□□□□ -1.32
TPM1P09493 FDPSP5-201ENST00000399474 1057 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms