Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.47□□□□□ -1.37
CNOT4O95628 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.47□□□□□ -1.37
CNOT4O95628 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNOT4O95628 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNOT4O95628 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNOT4O95628 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNOT4O95628 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CNOT4O95628 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CNOT4O95628 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CNOT4O95628 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CNOT4O95628 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CNOT4O95628 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CNOT4O95628 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CNOT4O95628 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
CNOT4O95628 AC034229.2-201ENST00000566945 2508 ntBASIC6.46□□□□□ -1.37
CNOT4O95628 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CNOT4O95628 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CNOT4O95628 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CNOT4O95628 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CNOT4O95628 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CNOT4O95628 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CNOT4O95628 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CNOT4O95628 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 RNU6-354P-201ENST00000383862 107 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 RNU6-610P-201ENST00000384264 107 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CNOT4O95628 OOSP1-201ENST00000398992 1270 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 HMGB3P19-201ENST00000403971 560 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 SOD1P1-201ENST00000407803 440 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 SNORA11D-201ENST00000408548 128 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 SNORA11E-201ENST00000408778 128 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 AC024937.2-201ENST00000411669 1242 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 BX664727.1-201ENST00000416024 466 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC127537.1-201ENST00000418183 748 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CNOT4O95628 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.46□□□□□ -1.38
CNOT4O95628 GAPDHP69-201ENST00000425504 1008 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 CYP4F34P-201ENST00000425951 481 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC009362.1-201ENST00000427253 406 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC004022.1-201ENST00000447766 1066 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.46□□□□□ -1.38
CNOT4O95628 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC096922.1-201ENST00000461635 651 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC008379.1-201ENST00000463655 464 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC040975.1-201ENST00000472104 316 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 IGLVI-42-201ENST00000522485 381 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC087373.1-201ENST00000524920 491 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.46□□□□□ -1.38
CNOT4O95628 EEF1B2P1-201ENST00000567221 672 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC016839.1-201ENST00000578162 867 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AP005136.1-201ENST00000579765 429 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 MIR378H-201ENST00000579966 83 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.46□□□□□ -1.38
CNOT4O95628 PRR13P5-201ENST00000596581 442 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 MIMT1-201ENST00000597105 1050 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 SNX6P1-201ENST00000601728 1224 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AL023806.2-201ENST00000603042 263 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC012510.1-201ENST00000607946 759 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC027271.1-201ENST00000610270 610 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC005899.6-201ENST00000620729 297 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AC130456.6-201ENST00000623745 765 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 AL590396.3-201ENST00000636334 300 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.46□□□□□ -1.38
CNOT4O95628 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.46□□□□□ -1.38
CNOT4O95628 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CNOT4O95628 AC069222.1-201ENST00000608028 3360 ntBASIC6.46□□□□□ -1.38
CNOT4O95628 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms