Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU4ATAC-201ENST00000580972 127 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX3O60493 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX3O60493 WDR45BP1-201ENST00000583470 1029 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 AC073046.2-201ENST00000604756 527 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AL592504.1-201ENST00000605319 439 ntBASIC6.04□□□□□ -1.44
SNX3O60493 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX3O60493 AL355974.3-201ENST00000617383 467 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AC005618.4-201ENST00000625053 554 ntBASIC6.04□□□□□ -1.44
SNX3O60493 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX3O60493 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX3O60493 RBPJP6-201ENST00000411556 1431 ntBASIC6.04□□□□□ -1.44
SNX3O60493 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX3O60493 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 AL449283.1-201ENST00000602631 3403 ntBASIC6.03□□□□□ -1.44
SNX3O60493 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX3O60493 CR383656.5-201ENST00000547616 1340 ntBASIC6.03□□□□□ -1.44
SNX3O60493 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SNX3O60493 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX3O60493 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNX3O60493 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNX3O60493 RN7SKP137-201ENST00000411074 307 ntBASIC6.03□□□□□ -1.44
SNX3O60493 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNX3O60493 RPL5P25-201ENST00000441148 775 ntBASIC6.03□□□□□ -1.44
SNX3O60493 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 CUBNP2-201ENST00000443534 1139 ntBASIC6.03□□□□□ -1.44
SNX3O60493 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX3O60493 RPS12P20-201ENST00000464109 380 ntBASIC6.03□□□□□ -1.44
SNX3O60493 RN7SL223P-201ENST00000470401 294 ntBASIC6.03□□□□□ -1.44
SNX3O60493 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX3O60493 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX3O60493 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX3O60493 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 AC026956.1-201ENST00000558741 396 ntBASIC6.03□□□□□ -1.44
SNX3O60493 RN7SL475P-201ENST00000583379 298 ntBASIC6.03□□□□□ -1.44
SNX3O60493 MIR5682-201ENST00000584864 76 ntBASIC6.03□□□□□ -1.44
SNX3O60493 DYNLL1P1-201ENST00000595442 269 ntBASIC6.03□□□□□ -1.44
SNX3O60493 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX3O60493 AC012510.1-201ENST00000607946 759 ntBASIC6.03□□□□□ -1.44
SNX3O60493 FRG2MP-201ENST00000613317 856 ntBASIC6.03□□□□□ -1.44
SNX3O60493 AC015712.7-201ENST00000615211 635 ntBASIC6.03□□□□□ -1.44
SNX3O60493 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX3O60493 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
SNX3O60493 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX3O60493 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
SNX3O60493 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 AC092701.1-201ENST00000623627 1551 ntBASIC6.02□□□□□ -1.45
SNX3O60493 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SNX3O60493 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 SNX18P13-201ENST00000412442 529 ntBASIC6.02□□□□□ -1.45
SNX3O60493 RPLP1P10-201ENST00000413972 339 ntBASIC6.02□□□□□ -1.45
SNX3O60493 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 VN1R3-201ENST00000418822 919 ntBASIC6.02□□□□□ -1.45
SNX3O60493 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX3O60493 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 AL596268.1-201ENST00000427910 1048 ntBASIC6.02□□□□□ -1.45
SNX3O60493 PRPS1P2-201ENST00000430496 937 ntBASIC6.02□□□□□ -1.45
SNX3O60493 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 TPTE2P1-204ENST00000435256 593 ntBASIC6.02□□□□□ -1.45
SNX3O60493 RPS13P2-201ENST00000437890 455 ntBASIC6.02□□□□□ -1.45
SNX3O60493 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX3O60493 RPL23AP60-201ENST00000450011 454 ntBASIC6.02□□□□□ -1.45
SNX3O60493 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX3O60493 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.02□□□□□ -1.45
SNX3O60493 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX3O60493 DEFB109A-201ENST00000482450 265 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms