Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SDCBPO00560 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 AL353743.3-201ENST00000442109 1468 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.24□□□□□ -1.57
SDCBPO00560 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SDCBPO00560 AL096800.1-201ENST00000405326 893 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 GPN3P1-201ENST00000423883 535 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 PSMD8P1-201ENST00000436275 769 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 AL390879.1-201ENST00000439143 386 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 GAPDHP37-201ENST00000442317 968 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 PPIAP32-201ENST00000449940 472 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 RPS7P11-201ENST00000484240 586 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 RN7SL714P-201ENST00000487050 298 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.24□□□□□ -1.57
SDCBPO00560 AC093664.1-201ENST00000511779 289 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SDCBPO00560 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 AC037479.1-201ENST00000558361 625 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.24□□□□□ -1.57
SDCBPO00560 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 AP001267.4-201ENST00000602598 545 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 U91328.4-201ENST00000608919 517 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.24□□□□□ -1.57
SDCBPO00560 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 AC004656.1-201ENST00000568479 4951 ntBASIC5.24□□□□□ -1.57
SDCBPO00560 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SDCBPO00560 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.23□□□□□ -1.57
SDCBPO00560 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 SNORD94-201ENST00000386037 137 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AL365220.1-201ENST00000432923 399 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 WDR82P2-201ENST00000444540 928 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC010343.2-201ENST00000510162 224 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC008429.4-201ENST00000521201 182 ntBASIC5.23□□□□□ -1.57
SDCBPO00560 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SDCBPO00560 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.23□□□□□ -1.57
SDCBPO00560 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.23□□□□□ -1.57
SDCBPO00560 MIR132-201ENST00000591554 101 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms