Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.72□□□□□ -1.33
O00370 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.72□□□□□ -1.33
O00370 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.72□□□□□ -1.33
O00370 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.72□□□□□ -1.33
O00370 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
O00370 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.72□□□□□ -1.33
O00370 LINC01616-201ENST00000561816 2280 ntBASIC6.72□□□□□ -1.33
O00370 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
O00370 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
O00370 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
O00370 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.72□□□□□ -1.33
O00370 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.72□□□□□ -1.33
O00370 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
O00370 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
O00370 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.72□□□□□ -1.33
O00370 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
O00370 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
O00370 GUCY1B2-204ENST00000531898 1979 ntBASIC6.71□□□□□ -1.33
O00370 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
O00370 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
O00370 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
O00370 AL049634.1-201ENST00000453770 1720 ntBASIC6.71□□□□□ -1.34
O00370 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
O00370 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.71□□□□□ -1.34
O00370 RNU1-59P-201ENST00000364829 162 ntBASIC6.71□□□□□ -1.34
O00370 RNU6-316P-201ENST00000391027 107 ntBASIC6.71□□□□□ -1.34
O00370 UBE2V1P14-201ENST00000415815 558 ntBASIC6.71□□□□□ -1.34
O00370 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.71□□□□□ -1.34
O00370 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.71□□□□□ -1.34
O00370 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.71□□□□□ -1.34
O00370 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.71□□□□□ -1.34
O00370 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.71□□□□□ -1.34
O00370 AC112492.2-201ENST00000432774 1030 ntBASIC6.71□□□□□ -1.34
O00370 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.71□□□□□ -1.34
O00370 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.71□□□□□ -1.34
O00370 AC097359.1-201ENST00000447946 463 ntBASIC6.71□□□□□ -1.34
O00370 H3F3AP5-201ENST00000475267 429 ntBASIC6.71□□□□□ -1.34
O00370 AC092349.1-201ENST00000504903 310 ntBASIC6.71□□□□□ -1.34
O00370 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.71□□□□□ -1.34
O00370 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.71□□□□□ -1.34
O00370 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.71□□□□□ -1.34
O00370 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.71□□□□□ -1.34
O00370 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.71□□□□□ -1.34
O00370 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.71□□□□□ -1.34
O00370 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.71□□□□□ -1.34
O00370 AC138207.8-204ENST00000579588 527 ntBASIC6.71□□□□□ -1.34
O00370 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.71□□□□□ -1.34
O00370 U1.25-201ENST00000614085 162 ntBASIC6.71□□□□□ -1.34
O00370 U1.34-201ENST00000618578 162 ntBASIC6.71□□□□□ -1.34
O00370 U1.31-201ENST00000620022 160 ntBASIC6.71□□□□□ -1.34
O00370 AC010325.3-201ENST00000641084 394 ntBASIC6.71□□□□□ -1.34
O00370 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.71□□□□□ -1.34
O00370 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
O00370 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
O00370 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
O00370 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
O00370 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 AC011369.2-201ENST00000624423 1567 ntBASIC6.7□□□□□ -1.34
O00370 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
O00370 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 MTND2P12-201ENST00000417560 1252 ntBASIC6.7□□□□□ -1.34
O00370 RPS7P14-201ENST00000426405 583 ntBASIC6.7□□□□□ -1.34
O00370 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 SOCS5P1-201ENST00000440415 949 ntBASIC6.7□□□□□ -1.34
O00370 CXCR2P1-202ENST00000443392 1074 ntBASIC6.7□□□□□ -1.34
O00370 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 AC044810.1-201ENST00000480271 711 ntBASIC6.7□□□□□ -1.34
O00370 AC106822.1-201ENST00000502647 526 ntBASIC6.7□□□□□ -1.34
O00370 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 OR5D2P-201ENST00000524390 911 ntBASIC6.7□□□□□ -1.34
O00370 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.7□□□□□ -1.34
O00370 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
O00370 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
O00370 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.7□□□□□ -1.34
O00370 AC011500.1-201ENST00000601963 469 ntBASIC6.7□□□□□ -1.34
O00370 SNORA74.4-201ENST00000607595 199 ntBASIC6.7□□□□□ -1.34
O00370 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms