Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AL591135.1-201ENST00000401578 5914 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC188H7C350 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC188H7C350 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC188H7C350 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC188H7C350 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 GRPEL2P2-201ENST00000421856 670 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC188H7C350 E2F6P1-201ENST00000428850 745 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 VN1R53P-201ENST00000429536 957 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 FECHP1-201ENST00000431896 1214 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 AC092106.2-201ENST00000436597 487 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 E2F6P3-201ENST00000441743 743 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 COL11A2P1-205ENST00000441798 676 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 AL845321.1-201ENST00000444603 348 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 AL353803.3-201ENST00000444641 335 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC009963.4-201ENST00000448535 339 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 RPL23AP60-201ENST00000450011 454 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC188H7C350 RN7SL352P-201ENST00000466002 277 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 RPS3AP49-201ENST00000472161 790 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 TRBV5-2-201ENST00000489095 273 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC188H7C350 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 RPL29P33-201ENST00000587474 316 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC188H7C350 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC188H7C350 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 AL031658.2-201ENST00000616850 651 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC188H7C350 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 AC078880.4-201ENST00000617627 1749 ntBASIC6.44□□□□□ -1.38
CCDC188H7C350 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC188H7C350 AL355488.2-201ENST00000609909 2850 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC188H7C350 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC188H7C350 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC188H7C350 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC188H7C350 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC188H7C350 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC188H7C350 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC188H7C350 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC188H7C350 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC188H7C350 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC188H7C350 SNORA77.2-201ENST00000408571 112 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC188H7C350 NFYAP1-201ENST00000431953 972 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 MRPS21P3-201ENST00000436696 262 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC188H7C350 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC188H7C350 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC188H7C350 RN7SKP198-201ENST00000459286 306 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 RPL5P16-201ENST00000471467 790 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC188H7C350 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC188H7C350 AC018645.1-201ENST00000505003 109 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC188H7C350 ST13P12-201ENST00000508958 1094 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 AC114940.1-201ENST00000512162 1265 ntBASIC6.43□□□□□ -1.38
CCDC188H7C350 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC188H7C350 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC188H7C350 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms