Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC010653.3-201ENST00000635332 232 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC127502.3-201ENST00000636170 1206 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL137058.3-201ENST00000624531 3099 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 NF1P7-201ENST00000612076 1530 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL355852.1-201ENST00000454081 1771 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC062029.1-202ENST00000606164 3651 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RNU6-931P-201ENST00000363850 107 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CENPW-202ENST00000368326 443 ntTSL 2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 SNORA10-201ENST00000384084 133 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 TRBV7-5-201ENST00000390382 345 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL035419.1-201ENST00000397037 564 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 DEFB108C-201ENST00000400154 252 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL121977.1-201ENST00000401636 979 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ZNF603P-201ENST00000405613 487 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 OR5AW1P-201ENST00000426334 1006 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 DSTNP5-201ENST00000427921 523 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 KCTD9P1-201ENST00000430462 1167 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 MED14P1-201ENST00000430517 648 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RPL35P8-201ENST00000433284 337 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 USP9YP35-201ENST00000435696 412 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 NEFLP1-201ENST00000436364 984 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL590682.1-201ENST00000437248 344 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ASS1P4-201ENST00000439462 1234 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC002542.1-201ENST00000440683 193 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CDC42P1-201ENST00000456658 548 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 NDUFB4P1-201ENST00000462398 381 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RPL5P13-201ENST00000462840 709 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RN7SL705P-201ENST00000481678 294 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RN7SL472P-201ENST00000492799 293 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC027338.2-201ENST00000504382 526 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RNU6-1334P-201ENST00000516032 105 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RN7SKP105-201ENST00000517192 314 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL606834.2-201ENST00000602954 668 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL133520.1-201ENST00000610430 700 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms