Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC015977.1-201ENST00000418887 292 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 SDR42E1P3-201ENST00000438345 502 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC112187.1-201ENST00000455837 479 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SL413P-201ENST00000482700 297 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC130364.2-201ENST00000528639 604 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC023968.1-201ENST00000560719 475 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC068408.1-201ENST00000577406 1144 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 ADAD1P2-201ENST00000588476 646 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC022387.2-201ENST00000604050 448 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC068726.1-201ENST00000610993 341 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 MIR7159-201ENST00000620587 66 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC004808.2-201ENST00000627965 773 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AC116667.2-201ENST00000641075 823 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 OR7A1P-202ENST00000641542 1158 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF101P1-201ENST00000435701 1720 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AKAP17BP-201ENST00000431706 2719 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC003045.1-201ENST00000398779 713 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AL033519.1-201ENST00000407266 307 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SKP151-201ENST00000410230 316 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RNA5SP231-201ENST00000410496 138 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 UBTFL2-201ENST00000411859 1191 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 DHFRP2-201ENST00000414224 547 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC013470.3-201ENST00000420252 1194 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC106901.1-201ENST00000425086 698 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RPS6P14-201ENST00000425165 719 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 EIF2S2P3-201ENST00000428356 999 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC114878.1-201ENST00000441166 358 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 COX4I1P2-201ENST00000447446 547 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RANP2-201ENST00000456833 229 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RARRES2P3-201ENST00000457739 473 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AL035690.1-201ENST00000490892 383 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SKP248-201ENST00000516278 305 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RNA5SP400-201ENST00000517155 111 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 RNU4ATAC-201ENST00000580972 127 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC007423.1-201ENST00000605009 627 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AP002371.2-201ENST00000624450 503 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AC080188.3-201ENST00000624842 748 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 AL163152.1-201ENST00000642001 374 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 OR7E91P-202ENST00000642062 1198 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms