Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 OR7E96P-201ENST00000530816 976 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC068631.3-201ENST00000538831 225 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC084373.1-201ENST00000603311 235 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL450270.1-201ENST00000606160 391 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL158063.1-201ENST00000615349 536 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 HTR1DP1-201ENST00000616500 888 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 USP12-203ENST00000620323 349 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 METAP1-212ENST00000625963 147 ntTSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL096816.1-201ENST00000623300 2920 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 SAMMSON-222ENST00000641901 2727 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 TRIM51HP-202ENST00000530412 1823 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 FTO-222ENST00000637969 2889 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 SNORA72.1-201ENST00000363485 129 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 SNORA11.5-201ENST00000408163 128 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AL662791.3-201ENST00000413771 776 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 VN1R36P-201ENST00000414936 291 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC231533.2-201ENST00000419045 978 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 YWHAZP5-201ENST00000419975 730 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AL590682.1-201ENST00000437248 344 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AL604028.2-201ENST00000437848 788 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC019080.2-201ENST00000453859 394 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CDC42P4-201ENST00000510507 563 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 SETP21-201ENST00000514799 892 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC138938.1-201ENST00000515431 782 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PDCL3P1-201ENST00000534575 734 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC061975.3-201ENST00000583209 244 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC022432.1-201ENST00000595739 310 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 RN7SL778P-201ENST00000607160 297 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC004241.3-201ENST00000611728 517 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC025162.2-201ENST00000619602 560 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 MTND5P12-201ENST00000502851 1449 ntBASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC9.55□□□□□ -0.88
PDZRN3Q9UPQ7 AL023806.3-201ENST00000638502 2704 ntBASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDZRN3Q9UPQ7 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms