Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 NENFP1-201ENST00000419476 466 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 MORF4L1P7-201ENST00000426038 703 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 Z84478.1-201ENST00000438230 1219 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC006326.1-201ENST00000445465 787 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC099670.1-201ENST00000455141 783 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 MTND2P39-201ENST00000457230 764 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC098818.1-201ENST00000478593 252 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 OR11I1P-201ENST00000486033 954 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 RPS10P20-201ENST00000494130 463 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC021146.11-201ENST00000503319 491 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC010468.3-201ENST00000508225 458 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC112225.1-201ENST00000508230 297 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 OR9G2P-201ENST00000533326 880 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC140063.1-201ENST00000541343 259 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC007068.2-201ENST00000543168 395 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 DUX4L52-201ENST00000549363 777 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC107958.1-201ENST00000556576 290 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 FAM106CP-201ENST00000582212 507 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC087575.1-201ENST00000585087 229 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 MTCO2P22-201ENST00000603246 681 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 OR8G7P-201ENST00000616658 848 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 AL158062.1-201ENST00000619632 745 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 CASC19-212ENST00000641153 1287 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 OR5AC4P-202ENST00000642086 985 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LRFN1Q9P244 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRFN1Q9P244 AC007993.1-201ENST00000621298 2430 ntBASIC6.24□□□□□ -1.41
LRFN1Q9P244 DDX43P1-201ENST00000510713 1763 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC104837.1-201ENST00000444644 1587 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 UBTFL2-201ENST00000411859 1191 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AC092601.1-201ENST00000444526 383 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 PFN1P11-201ENST00000445829 389 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRFN1Q9P244 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.23□□□□□ -1.41
LRFN1Q9P244 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 RPL5P12-201ENST00000477071 851 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 RPL23AP73-201ENST00000492507 471 ntBASIC6.23□□□□□ -1.41
LRFN1Q9P244 MTND3P3-201ENST00000505004 126 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms