Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-467P-201ENST00000517027 110 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AP000620.1-201ENST00000527147 504 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 AP004609.2-201ENST00000532177 190 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 CYCSP38-201ENST00000559840 322 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL731537.2-201ENST00000561565 951 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 NDUFA5P11-201ENST00000567995 343 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AC005972.3-201ENST00000606304 481 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 AC106730.3-201ENST00000624568 641 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL163152.1-201ENST00000642001 374 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL391262.1-201ENST00000556558 1992 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 LYARP1-201ENST00000436977 1501 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 LPAL2-203ENST00000454031 2498 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 COX6B1P3-201ENST00000312310 260 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 RPL7AP14-201ENST00000424041 802 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC097463.1-201ENST00000447288 481 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AL158068.1-201ENST00000506116 616 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC021146.10-201ENST00000515628 706 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AP001858.2-201ENST00000536213 601 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC009268.1-201ENST00000561352 1203 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 MIR5095-201ENST00000578844 88 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 MIR6861-201ENST00000618657 64 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 AC013488.1-201ENST00000526618 1838 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 FO082842.1-201ENST00000423552 1370 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.17□□□□□ -1.26
COL20A1Q9P218 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL20A1Q9P218 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL20A1Q9P218 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 TNPO1P2-201ENST00000426249 2665 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 UGT2B27P-201ENST00000505092 1620 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 MAPK10-287ENST00000641217 3037 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC025809.2-201ENST00000625085 1802 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL20A1Q9P218 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AL050335.1-201ENST00000396909 869 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC106800.3-201ENST00000511389 308 ntBASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.16□□□□□ -1.26
COL20A1Q9P218 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms