Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 AC013488.1-201ENST00000526618 1838 ntBASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.62□□□□□ -1.35
CCM2LQ9NUG4 AC090220.1-201ENST00000593078 1699 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 SOCS5P5-201ENST00000402732 1586 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 TPTE2P2-201ENST00000403471 1466 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 SAMMSON-203ENST00000641005 2168 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 KYNUP1-201ENST00000466683 1406 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC027279.4-201ENST00000624371 2072 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 RNU1-38P-201ENST00000362817 144 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 HMGB1P10-201ENST00000395823 563 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 UBE2V1P9-201ENST00000414760 368 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC115285.1-201ENST00000424879 736 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC009362.1-201ENST00000427253 406 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 MTCO1P43-201ENST00000431831 488 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC092447.2-201ENST00000435487 669 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 PSMD8P1-201ENST00000436275 769 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC044797.1-201ENST00000445744 679 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 PPIAP32-201ENST00000449940 472 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 PMS2P11-201ENST00000451831 574 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 RBMY2EP-202ENST00000456360 940 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AP001804.2-201ENST00000533932 910 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AP000919.1-202ENST00000581139 1264 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 OR1N1-202ENST00000619659 939 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL356863.1-201ENST00000623378 1080 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL590396.3-201ENST00000636334 300 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AC135068.11-201ENST00000636378 921 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCM2LQ9NUG4 VEZF1P1-201ENST00000423931 1541 ntBASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCM2LQ9NUG4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms