Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 USP9YP3-201ENST00000434481 1766 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 RNA5SP110-201ENST00000362638 115 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 RNA5SP232-201ENST00000364144 119 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 RBBP4P5-201ENST00000398583 1266 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 HMGA1P8-201ENST00000414130 321 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 RPSAP65-201ENST00000429660 595 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 AC079922.1-201ENST00000443291 359 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 AC112187.1-201ENST00000455837 479 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 MARK2P8-201ENST00000476069 952 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 AC091874.2-201ENST00000505889 720 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 AC018797.1-201ENST00000510791 255 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 RNA5SP434-201ENST00000516647 121 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 MRPS21P8-201ENST00000569196 235 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 AC020916.2-201ENST00000591242 360 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.59□□□□□ -1.35
CISHQ9NSE2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CISHQ9NSE2 AC079753.1-201ENST00000623243 3868 ntBASIC6.59□□□□□ -1.35
CISHQ9NSE2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CISHQ9NSE2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CISHQ9NSE2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CISHQ9NSE2 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CISHQ9NSE2 AC009831.5-201ENST00000624000 3189 ntBASIC6.59□□□□□ -1.36
CISHQ9NSE2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.59□□□□□ -1.36
CISHQ9NSE2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 RN7SL254P-201ENST00000460609 284 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 MAST4-IT1-201ENST00000514241 658 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC021269.1-201ENST00000526860 705 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC090115.2-201ENST00000548060 883 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 MIR3154-201ENST00000577829 84 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 AC141002.1-201ENST00000607025 279 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 MIR6780B-201ENST00000610307 79 ntBASIC6.58□□□□□ -1.36
CISHQ9NSE2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CISHQ9NSE2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CISHQ9NSE2 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CISHQ9NSE2 AC027575.3-201ENST00000583058 2747 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CISHQ9NSE2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 HSPD1P4-201ENST00000547203 1702 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CISHQ9NSE2 RN7SKP237-201ENST00000364663 301 ntBASIC6.57□□□□□ -1.36
CISHQ9NSE2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CISHQ9NSE2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms