Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM4Q9C037 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 AL355355.1-201ENST00000442900 793 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 AC010878.1-201ENST00000456500 1047 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 NMNAT1P3-201ENST00000457517 888 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AC094085.1-201ENST00000468914 584 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 RN7SL379P-201ENST00000479912 293 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 COX6B1P2-201ENST00000489624 230 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 AC026951.2-201ENST00000613847 241 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AP005212.3-201ENST00000619964 528 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AC026124.2-201ENST00000621847 656 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AL109924.4-201ENST00000623089 670 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 QRSL1P1-201ENST00000400977 1540 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM4Q9C037 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM4Q9C037 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 AC062022.1-201ENST00000451026 1684 ntBASIC6.49□□□□□ -1.37
TRIM4Q9C037 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AL049634.1-201ENST00000453770 1720 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AP005435.3-201ENST00000531260 3198 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC010894.1-201ENST00000313760 361 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 RNA5SP85-201ENST00000365378 119 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC026310.1-201ENST00000396004 378 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AHCYP8-201ENST00000425108 209 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC018804.1-201ENST00000430381 618 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC018797.1-201ENST00000510791 255 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AP005902.2-201ENST00000518393 307 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 OR4A13P-201ENST00000529316 942 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC006512.2-201ENST00000543250 486 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 NXPE2P1-201ENST00000543705 726 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC092375.1-201ENST00000550410 637 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC026826.3-201ENST00000561747 158 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC012146.2-201ENST00000576545 416 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 NPM1P45-201ENST00000583151 559 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC008555.7-201ENST00000605008 583 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC073263.3-201ENST00000624449 858 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AL049541.2-201ENST00000626377 555 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 AP001052.1-201ENST00000626421 99 ntBASIC6.48□□□□□ -1.37
TRIM4Q9C037 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM4Q9C037 AC092724.1-201ENST00000624623 3397 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms