Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 snoU13.29-201ENST00000459370 104 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 RN7SL413P-201ENST00000482700 297 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LDHBP3-201ENST00000514909 822 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC006120.1-201ENST00000579375 546 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL352984.2-202ENST00000613699 155 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC114876.1-201ENST00000490962 1366 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 MIR27A-201ENST00000385073 78 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC003045.1-201ENST00000398779 713 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 OR52N3P-201ENST00000413417 934 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC002127.1-201ENST00000421305 225 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AP003385.1-201ENST00000426387 893 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 IGLV3-4-201ENST00000432300 244 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 RPS3AP38-201ENST00000435889 763 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 GAPDHP37-201ENST00000442317 968 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 RN7SL643P-201ENST00000471845 291 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 RPL5P33-201ENST00000487833 905 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 IGHV4-55-201ENST00000520889 368 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 OR6M2P-201ENST00000529831 871 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 MRPL45P2-203ENST00000573318 473 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 DYNLL1P1-201ENST00000595442 269 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AL591167.1-201ENST00000607321 456 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AL589743.6-201ENST00000611025 117 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 PCA3_2.1-201ENST00000612507 409 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 AC092070.2-203ENST00000598377 3644 ntBASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HDHD3Q9BSH5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AL359091.1-201ENST00000449048 1734 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 OR2W4P-201ENST00000406496 926 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 RN7SKP121-201ENST00000410842 305 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 DHFRP2-201ENST00000414224 547 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 GTF3AP6-201ENST00000432585 986 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 USP24P1-201ENST00000433802 779 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AL390879.1-201ENST00000439143 386 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AL079303.1-201ENST00000486611 463 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 GM2AP2-201ENST00000491764 562 ntBASIC5.17□□□□□ -1.58
HDHD3Q9BSH5 AC073648.3-201ENST00000504939 925 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms