Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ARSFP1-201ENST00000398758 477 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AL607077.1-201ENST00000401718 499 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 MRPS21P3-201ENST00000436696 262 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 MTND4P15-201ENST00000437913 1033 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 VN1R38P-201ENST00000450265 887 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 RPS7P11-201ENST00000484240 586 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC084851.2-201ENST00000530377 364 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC026956.1-201ENST00000558741 396 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 SYPL1P2-201ENST00000582878 727 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC019257.2-201ENST00000605539 497 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 MIR6085-201ENST00000618314 110 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC012254.5-201ENST00000623573 478 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC068213.1-201ENST00000625124 226 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 Z93929.1-201ENST00000418200 1475 ntBASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 RNU6-386P-201ENST00000362650 107 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 RNU6-564P-201ENST00000410983 104 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 KIF4CP-201ENST00000422742 1279 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 CYCSP52-201ENST00000422857 310 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AL645939.3-201ENST00000435408 225 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 CYCSP53-201ENST00000455540 265 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AL356390.1-201ENST00000455684 397 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 RN7SL83P-201ENST00000468131 297 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 RN7SL413P-201ENST00000482700 297 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC068522.1-201ENST00000482895 345 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC092824.1-201ENST00000483524 576 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 RN7SL104P-201ENST00000498686 293 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 IGHV1-14-201ENST00000523391 241 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC025423.2-201ENST00000537570 439 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 NPM1P45-201ENST00000583151 559 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 WBP1LP11-201ENST00000586141 328 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 WBP1LP8-201ENST00000617401 327 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 SAGE3P-201ENST00000619800 1635 ntBASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP3Q96JB5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 455.8 ms