Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 YES1P1-201ENST00000418510 1628 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
TOPBP1Q92547 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC10.1□□□□□ -0.79
TOPBP1Q92547 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 MIR433-201ENST00000384837 93 ntBASIC10.09□□□□□ -0.79
TOPBP1Q92547 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 AL031595.3-201ENST00000624919 14262 ntBASIC10.09□□□□□ -0.79
TOPBP1Q92547 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOPBP1Q92547 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC10.09□□□□□ -0.79
TOPBP1Q92547 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 U3.2-201ENST00000362981 210 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 GABARAPL3-201ENST00000412799 354 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 RPS12P17-201ENST00000438591 377 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 CUBNP2-201ENST00000443534 1139 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 AL606490.1-201ENST00000452266 765 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 AC100832.1-201ENST00000471945 383 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 AC026254.2-201ENST00000475295 371 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 RN7SL583P-201ENST00000475692 287 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 NRBF2P4-201ENST00000520874 850 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 OR5D15P-201ENST00000531671 942 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 AC105235.1-201ENST00000623208 1816 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 MRRFP1-201ENST00000435941 1675 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 EEF1A1P14-201ENST00000421195 1376 ntBASIC10.08□□□□□ -0.8
TOPBP1Q92547 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOPBP1Q92547 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
TOPBP1Q92547 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 RPL23AP27-201ENST00000415161 451 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 MGAT2P1-201ENST00000449718 797 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 FRG2FP-204ENST00000453982 852 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC095057.1-201ENST00000507583 168 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AP000662.1-201ENST00000530952 487 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 HMGN2P6-201ENST00000551091 273 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC119403.2-201ENST00000590960 598 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AP002884.5-201ENST00000595053 1132 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC005840.5-201ENST00000619166 599 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC104581.5-201ENST00000624171 7141 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC011815.2-201ENST00000618230 2021 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 SNORA56-201ENST00000383966 129 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC108161.1-201ENST00000461060 402 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 SUMO2P7-201ENST00000511179 285 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 OR56A7P-201ENST00000524865 941 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AL049872.1-201ENST00000556323 322 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC096996.1-201ENST00000563813 325 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms