Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 RNA5SP473-201ENST00000516402 125 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 Vault.2-201ENST00000516519 98 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 MIR3189-201ENST00000578735 73 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC022106.1-201ENST00000612834 766 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AL352984.2-202ENST00000613699 155 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AL591926.1-201ENST00000620542 217 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC073488.6-201ENST00000632293 754 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC022726.2-201ENST00000634673 547 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 CASC19-274ENST00000642018 970 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 OR8A1-204ENST00000642111 1145 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 AC022034.1-201ENST00000512867 2156 ntBASIC5.79□□□□□ -1.48
C9orf40Q8IXQ3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 RN7SKP187-201ENST00000365536 330 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AL451142.1-201ENST00000375867 775 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 SNORA70.9-201ENST00000384370 135 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 RPL7AP14-201ENST00000424041 802 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 PPIAP10-201ENST00000438675 458 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC016908.1-201ENST00000442571 1219 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AL355355.1-201ENST00000442900 793 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC093166.3-201ENST00000448785 303 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC019084.1-201ENST00000457337 432 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AP002453.1-201ENST00000492327 668 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC108103.1-201ENST00000511286 446 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 HSD3BP3-201ENST00000514706 994 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC107958.1-201ENST00000556576 290 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 MIR4701-201ENST00000583094 63 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 GLYATL1P2-202ENST00000588046 902 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC024589.2-201ENST00000605642 1294 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AL138960.1-201ENST00000613838 513 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC119674.1-213ENST00000641177 1386 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AP001541.1-201ENST00000623322 1904 ntBASIC5.78□□□□□ -1.48
C9orf40Q8IXQ3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.77□□□□□ -1.48
C9orf40Q8IXQ3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf40Q8IXQ3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf40Q8IXQ3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf40Q8IXQ3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf40Q8IXQ3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms