Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CIR1P2-201ENST00000514821 1342 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 RNU6-481P-201ENST00000384194 107 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 SNORD116-8-201ENST00000384365 95 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 SKINT1L-201ENST00000401057 817 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 SUMO2P13-201ENST00000403109 272 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AL359715.1-201ENST00000404330 555 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 RPL23AP18-201ENST00000416139 468 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 RPL22P18-201ENST00000417197 377 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 MORF4L1P6-201ENST00000418771 268 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 VN1R42P-201ENST00000424651 344 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 OSTCP5-201ENST00000425293 453 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CHCHD3P1-201ENST00000425516 676 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC007365.2-201ENST00000428806 458 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 MTCYBP29-201ENST00000436327 1006 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 MYL6P3-201ENST00000436904 432 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AL604028.2-201ENST00000437848 788 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC044797.1-201ENST00000445744 679 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC008410.1-201ENST00000483777 339 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC139272.1-201ENST00000505516 640 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC093770.1-201ENST00000511559 571 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CARSP2-201ENST00000520688 277 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 KCTD9P6-201ENST00000522306 950 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 VN1R78P-201ENST00000597393 564 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AP001153.1-201ENST00000641024 338 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 BX649567.1-201ENST00000642071 1134 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 AC079178.2-201ENST00000439323 1624 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 BRD7P1-201ENST00000557705 1915 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AL162171.3-201ENST00000617439 3178 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 RNU4-28P-201ENST00000364739 141 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 MIR99A-201ENST00000384906 81 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 RPL5P19-201ENST00000404228 893 ntBASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM48Q8IWZ4 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms