Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC122134.1-202ENST00000569111 1201 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC091133.5-201ENST00000603088 301 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC116165.3-201ENST00000614524 400 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL162233.1-201ENST00000620014 944 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC007347.2-201ENST00000623044 180 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC009120.7-201ENST00000623452 780 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC073488.9-201ENST00000631601 754 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC092701.1-201ENST00000623627 1551 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 CASC19-255ENST00000641733 1385 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 RN7SKP130-201ENST00000364924 301 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 MIR187-201ENST00000385062 109 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 U3.43-201ENST00000410734 213 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 MRPS21P5-201ENST00000417885 231 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 FECHP1-201ENST00000431896 1214 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CHCHD4P5-201ENST00000436684 427 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC092967.1-201ENST00000449016 481 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 RPL31P53-201ENST00000457065 348 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 SLC25A51P1-201ENST00000468432 871 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC022206.1-201ENST00000495947 347 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC131392.1-201ENST00000506490 633 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC008429.2-201ENST00000523057 864 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC020978.7-201ENST00000575953 1187 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC093635.1-201ENST00000609028 555 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 PCA3_2.1-201ENST00000612507 409 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 AL035425.4-201ENST00000624509 1063 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 AC027575.3-201ENST00000583058 2747 ntBASIC5.79□□□□□ -1.48
SHFQ7M4L6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.79□□□□□ -1.48
SHFQ7M4L6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHFQ7M4L6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms