Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC016839.1-201ENST00000578162 867 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AL451049.1-201ENST00000608672 497 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC018558.4-201ENST00000622153 281 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AC091059.2-201ENST00000623355 614 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AC025262.3-201ENST00000623666 360 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AC008626.2-201ENST00000624425 248 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SCN1BQ07699 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN1BQ07699 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN1BQ07699 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SCN1BQ07699 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 AL355834.1-201ENST00000556602 3965 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 HSPD1P7-201ENST00000447985 1686 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCN1BQ07699 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCN1BQ07699 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 MIR301B-201ENST00000390813 78 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCN1BQ07699 PDCL3P5-201ENST00000398028 722 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL662791.3-201ENST00000413771 776 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC239367.3-201ENST00000428996 814 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 Z68868.1-201ENST00000429048 544 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 PAICSP2-201ENST00000429118 1150 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 XKRYP6-201ENST00000440468 1116 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 RPS19P6-201ENST00000441327 433 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 XKRYP3-201ENST00000442113 1116 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 MEF2AP1-201ENST00000454867 863 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 SRP68P2-201ENST00000456184 254 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 AL096803.1-201ENST00000456921 1021 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 AC108751.3-201ENST00000461814 1020 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 AC093827.1-201ENST00000480094 861 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 RN7SL776P-201ENST00000493390 268 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.73□□□□□ -1.49
SCN1BQ07699 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC021820.1-201ENST00000525564 808 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.73□□□□□ -1.49
SCN1BQ07699 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC106785.4-201ENST00000569492 412 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.73□□□□□ -1.49
SCN1BQ07699 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL035410.2-201ENST00000604963 864 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 BNIP3P7-201ENST00000605641 516 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL356608.1-201ENST00000610034 820 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 MIR6726-201ENST00000613751 61 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 MIR6731-201ENST00000614863 72 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AL158062.1-201ENST00000619632 745 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC000095.2-202ENST00000637415 154 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN1BQ07699 AC102941.1-201ENST00000567616 1537 ntBASIC5.73□□□□□ -1.49
SCN1BQ07699 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms