Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.36□□□□□ -1.39
CBX1P83916 OR7E94P-202ENST00000601375 790 ntBASIC6.36□□□□□ -1.39
CBX1P83916 AC007262.1-201ENST00000604099 321 ntBASIC6.36□□□□□ -1.39
CBX1P83916 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.36□□□□□ -1.39
CBX1P83916 AC016542.3-201ENST00000623520 619 ntBASIC6.36□□□□□ -1.39
CBX1P83916 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.36□□□□□ -1.39
CBX1P83916 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.36□□□□□ -1.39
CBX1P83916 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CBX1P83916 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CBX1P83916 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.36□□□□□ -1.39
CBX1P83916 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CBX1P83916 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.35□□□□□ -1.39
CBX1P83916 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CBX1P83916 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.35□□□□□ -1.39
CBX1P83916 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.35□□□□□ -1.39
CBX1P83916 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 ARMCX7P-201ENST00000372828 562 ntBASIC6.35□□□□□ -1.39
CBX1P83916 SNORD15A-201ENST00000384214 148 ntBASIC6.35□□□□□ -1.39
CBX1P83916 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC6.35□□□□□ -1.39
CBX1P83916 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.35□□□□□ -1.39
CBX1P83916 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 AC018892.2-201ENST00000457656 693 ntBASIC6.35□□□□□ -1.39
CBX1P83916 RN7SL508P-201ENST00000464472 303 ntBASIC6.35□□□□□ -1.39
CBX1P83916 RN7SL216P-201ENST00000471607 298 ntBASIC6.35□□□□□ -1.39
CBX1P83916 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 RN7SL608P-201ENST00000492377 279 ntBASIC6.35□□□□□ -1.39
CBX1P83916 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.35□□□□□ -1.39
CBX1P83916 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.35□□□□□ -1.39
CBX1P83916 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.35□□□□□ -1.39
CBX1P83916 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.35□□□□□ -1.39
CBX1P83916 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.35□□□□□ -1.39
CBX1P83916 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.35□□□□□ -1.39
CBX1P83916 Z95327.3-201ENST00000610385 572 ntBASIC6.35□□□□□ -1.39
CBX1P83916 BNIP3P41-202ENST00000616656 861 ntBASIC6.35□□□□□ -1.39
CBX1P83916 MIR6732-201ENST00000619365 60 ntBASIC6.35□□□□□ -1.39
CBX1P83916 AC005355.2-201ENST00000625064 484 ntBASIC6.35□□□□□ -1.39
CBX1P83916 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.35□□□□□ -1.39
CBX1P83916 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.35□□□□□ -1.39
CBX1P83916 FOLH1B-202ENST00000529567 2145 ntBASIC6.35□□□□□ -1.39
CBX1P83916 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CBX1P83916 AC099654.3-201ENST00000447087 1546 ntBASIC6.35□□□□□ -1.39
CBX1P83916 ADAM5-202ENST00000399789 1942 ntBASIC6.35□□□□□ -1.39
CBX1P83916 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CBX1P83916 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.34□□□□□ -1.39
CBX1P83916 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.34□□□□□ -1.39
CBX1P83916 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CBX1P83916 MIR181C-201ENST00000384881 110 ntBASIC6.34□□□□□ -1.39
CBX1P83916 FDPSP5-201ENST00000399474 1057 ntBASIC6.34□□□□□ -1.39
CBX1P83916 EIF4A1P13-201ENST00000415667 230 ntBASIC6.34□□□□□ -1.39
CBX1P83916 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.34□□□□□ -1.39
CBX1P83916 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CBX1P83916 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CBX1P83916 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.34□□□□□ -1.39
CBX1P83916 PDCL3P4-201ENST00000489621 720 ntBASIC6.34□□□□□ -1.39
CBX1P83916 AC127024.1-201ENST00000490847 418 ntBASIC6.34□□□□□ -1.39
CBX1P83916 AC021146.11-201ENST00000503319 491 ntBASIC6.34□□□□□ -1.39
CBX1P83916 AC106800.3-201ENST00000511389 308 ntBASIC6.34□□□□□ -1.39
CBX1P83916 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.34□□□□□ -1.39
CBX1P83916 AC084824.2-201ENST00000548906 345 ntBASIC6.34□□□□□ -1.39
CBX1P83916 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.34□□□□□ -1.39
CBX1P83916 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CBX1P83916 AC126615.2-201ENST00000553003 515 ntBASIC6.34□□□□□ -1.39
CBX1P83916 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.34□□□□□ -1.39
CBX1P83916 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CBX1P83916 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.34□□□□□ -1.39
CBX1P83916 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.34□□□□□ -1.39
CBX1P83916 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CBX1P83916 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.34□□□□□ -1.39
CBX1P83916 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 AL669830.1-201ENST00000621457 656 ntBASIC6.34□□□□□ -1.39
CBX1P83916 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 LINC01808-203ENST00000641932 1643 ntBASIC6.34□□□□□ -1.39
CBX1P83916 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CBX1P83916 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CBX1P83916 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms