Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 AC090826.1-203ENST00000569235 490 ntBASIC4.78□□□□□ -1.64
CCL20P78556 RN7SL475P-201ENST00000583379 298 ntBASIC4.78□□□□□ -1.64
CCL20P78556 RN7SL25P-201ENST00000583862 260 ntBASIC4.78□□□□□ -1.64
CCL20P78556 AC090241.1-201ENST00000587732 621 ntBASIC4.78□□□□□ -1.64
CCL20P78556 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL20P78556 MIR7159-201ENST00000620587 66 ntBASIC4.78□□□□□ -1.64
CCL20P78556 AC087893.2-201ENST00000623272 255 ntBASIC4.78□□□□□ -1.64
CCL20P78556 AC119674.1-217ENST00000641942 1086 ntBASIC4.78□□□□□ -1.64
CCL20P78556 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 AC002525.1-201ENST00000624392 1622 ntBASIC4.78□□□□□ -1.64
CCL20P78556 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL20P78556 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
CCL20P78556 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CCL20P78556 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.77□□□□□ -1.65
CCL20P78556 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCL20P78556 SNORA43.1-201ENST00000364863 140 ntBASIC4.77□□□□□ -1.65
CCL20P78556 U3.14-201ENST00000365363 227 ntBASIC4.77□□□□□ -1.65
CCL20P78556 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 LDHAP5-201ENST00000394996 622 ntBASIC4.77□□□□□ -1.65
CCL20P78556 PDCL3P5-201ENST00000398028 722 ntBASIC4.77□□□□□ -1.65
CCL20P78556 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 OR7E91P-201ENST00000400027 866 ntBASIC4.77□□□□□ -1.65
CCL20P78556 AL139184.1-202ENST00000422303 222 ntBASIC4.77□□□□□ -1.65
CCL20P78556 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL20P78556 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 AC023271.1-201ENST00000445936 1090 ntBASIC4.77□□□□□ -1.65
CCL20P78556 FRG2FP-204ENST00000453982 852 ntBASIC4.77□□□□□ -1.65
CCL20P78556 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL20P78556 RARRES2P3-201ENST00000457739 473 ntBASIC4.77□□□□□ -1.65
CCL20P78556 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.77□□□□□ -1.65
CCL20P78556 AP001646.2-201ENST00000528645 1156 ntBASIC4.77□□□□□ -1.65
CCL20P78556 AP004609.2-201ENST00000532177 190 ntBASIC4.77□□□□□ -1.65
CCL20P78556 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL20P78556 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.77□□□□□ -1.65
CCL20P78556 MIR4266-201ENST00000583300 55 ntBASIC4.77□□□□□ -1.65
CCL20P78556 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL20P78556 AC125494.2-201ENST00000602431 657 ntBASIC4.77□□□□□ -1.65
CCL20P78556 AC073046.2-201ENST00000604756 527 ntBASIC4.77□□□□□ -1.65
CCL20P78556 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 GTF2IP4-201ENST00000453092 2054 ntBASIC4.77□□□□□ -1.65
CCL20P78556 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCL20P78556 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL20P78556 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL20P78556 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.76□□□□□ -1.65
CCL20P78556 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.76□□□□□ -1.65
CCL20P78556 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCL20P78556 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCL20P78556 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCL20P78556 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL20P78556 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL20P78556 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.76□□□□□ -1.65
CCL20P78556 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL20P78556 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.76□□□□□ -1.65
CCL20P78556 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL20P78556 PPIAP24-201ENST00000328558 471 ntBASIC4.76□□□□□ -1.65
CCL20P78556 RN7SKP145-201ENST00000363291 303 ntBASIC4.76□□□□□ -1.65
CCL20P78556 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC4.76□□□□□ -1.65
CCL20P78556 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL20P78556 AC245036.1-201ENST00000391727 309 ntBASIC4.76□□□□□ -1.65
CCL20P78556 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.76□□□□□ -1.65
CCL20P78556 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 AL596268.1-201ENST00000427910 1048 ntBASIC4.76□□□□□ -1.65
CCL20P78556 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL20P78556 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC4.76□□□□□ -1.65
CCL20P78556 AC242426.1-201ENST00000435270 960 ntBASIC4.76□□□□□ -1.65
CCL20P78556 RPL14P5-201ENST00000436474 730 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms