Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.94□□□□□ -1.3
COPB1P53618 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.94□□□□□ -1.3
COPB1P53618 CHEK2P2-201ENST00000554701 672 ntBASIC6.94□□□□□ -1.3
COPB1P53618 TPRX1P1-201ENST00000557620 319 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.94□□□□□ -1.3
COPB1P53618 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COPB1P53618 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COPB1P53618 AC090651.1-201ENST00000567865 634 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC100832.2-201ENST00000582080 776 ntBASIC6.94□□□□□ -1.3
COPB1P53618 RN7SL475P-201ENST00000583379 298 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC010615.3-201ENST00000597319 394 ntBASIC6.94□□□□□ -1.3
COPB1P53618 MIR6813-201ENST00000621638 56 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COPB1P53618 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.94□□□□□ -1.3
COPB1P53618 AC022417.1-201ENST00000624768 1303 ntBASIC6.94□□□□□ -1.3
COPB1P53618 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.94□□□□□ -1.3
COPB1P53618 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
COPB1P53618 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COPB1P53618 AC096921.2-201ENST00000561507 1916 ntBASIC6.93□□□□□ -1.3
COPB1P53618 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COPB1P53618 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COPB1P53618 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COPB1P53618 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 AC005702.3-201ENST00000585345 1447 ntBASIC6.93□□□□□ -1.3
COPB1P53618 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.93□□□□□ -1.3
COPB1P53618 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COPB1P53618 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 SNORD16-201ENST00000362803 99 ntBASIC6.93□□□□□ -1.3
COPB1P53618 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COPB1P53618 AL353133.1-201ENST00000407695 401 ntBASIC6.93□□□□□ -1.3
COPB1P53618 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.93□□□□□ -1.3
COPB1P53618 PPIAP32-201ENST00000449940 472 ntBASIC6.93□□□□□ -1.3
COPB1P53618 VPS25P1-201ENST00000455691 508 ntBASIC6.93□□□□□ -1.3
COPB1P53618 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.93□□□□□ -1.3
COPB1P53618 AC089999.1-201ENST00000460336 374 ntBASIC6.93□□□□□ -1.3
COPB1P53618 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.93□□□□□ -1.3
COPB1P53618 RPL9P15-201ENST00000491096 532 ntBASIC6.93□□□□□ -1.3
COPB1P53618 AC093870.1-201ENST00000506837 213 ntBASIC6.93□□□□□ -1.3
COPB1P53618 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.93□□□□□ -1.3
COPB1P53618 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.93□□□□□ -1.3
COPB1P53618 SCARNA11.1-201ENST00000516918 132 ntBASIC6.93□□□□□ -1.3
COPB1P53618 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.93□□□□□ -1.3
COPB1P53618 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.93□□□□□ -1.3
COPB1P53618 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.93□□□□□ -1.3
COPB1P53618 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.93□□□□□ -1.3
COPB1P53618 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.93□□□□□ -1.3
COPB1P53618 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.93□□□□□ -1.3
COPB1P53618 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.93□□□□□ -1.3
COPB1P53618 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COPB1P53618 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 AC125238.2-201ENST00000430003 1440 ntBASIC6.93□□□□□ -1.3
COPB1P53618 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COPB1P53618 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COPB1P53618 AC018765.1-201ENST00000623357 3446 ntBASIC6.92□□□□□ -1.3
COPB1P53618 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
COPB1P53618 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.92□□□□□ -1.3
COPB1P53618 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COPB1P53618 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COPB1P53618 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COPB1P53618 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COPB1P53618 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COPB1P53618 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.92□□□□□ -1.3
COPB1P53618 SNORA40.4-201ENST00000390971 128 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC019178.1-201ENST00000392337 440 ntBASIC6.92□□□□□ -1.3
COPB1P53618 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.92□□□□□ -1.3
COPB1P53618 RN7SKP129-201ENST00000410288 299 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.92□□□□□ -1.3
COPB1P53618 AL672212.1-201ENST00000422246 400 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.92□□□□□ -1.3
COPB1P53618 GAPDHP34-201ENST00000432112 823 ntBASIC6.92□□□□□ -1.3
COPB1P53618 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.92□□□□□ -1.3
COPB1P53618 COL11A2P1-205ENST00000441798 676 ntBASIC6.92□□□□□ -1.3
COPB1P53618 NDUFA5P8-201ENST00000449019 346 ntBASIC6.92□□□□□ -1.3
COPB1P53618 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.92□□□□□ -1.3
COPB1P53618 RN7SL372P-201ENST00000461982 298 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC114728.1-201ENST00000488289 483 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.92□□□□□ -1.3
COPB1P53618 AC131935.1-201ENST00000524621 333 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AL133399.1-201ENST00000527476 298 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AP002004.1-206ENST00000532441 876 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.92□□□□□ -1.3
COPB1P53618 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.92□□□□□ -1.3
COPB1P53618 AC027229.1-201ENST00000583887 253 ntBASIC6.92□□□□□ -1.3
COPB1P53618 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.92□□□□□ -1.3
COPB1P53618 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.92□□□□□ -1.3
COPB1P53618 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.92□□□□□ -1.3
COPB1P53618 AL589863.1-201ENST00000595383 631 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms