Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HNF4AP41235 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 WDR82P2-201ENST00000444540 928 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.27□□□□□ -1.41
HNF4AP41235 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 RPS4XP17-201ENST00000479057 754 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 RN7SL502P-201ENST00000481857 290 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 NPM1P27-201ENST00000502784 830 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.27□□□□□ -1.41
HNF4AP41235 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.27□□□□□ -1.41
HNF4AP41235 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.27□□□□□ -1.41
HNF4AP41235 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.27□□□□□ -1.41
HNF4AP41235 MIR4732-201ENST00000581873 76 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.27□□□□□ -1.41
HNF4AP41235 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.27□□□□□ -1.41
HNF4AP41235 AC114477.1-201ENST00000605097 605 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 OR8G7P-201ENST00000616658 848 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.27□□□□□ -1.41
HNF4AP41235 MIR6503-201ENST00000622884 86 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 AC018659.2-201ENST00000624690 715 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.27□□□□□ -1.41
HNF4AP41235 AL359976.1-201ENST00000418655 3528 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 SMG1P5-202ENST00000529428 4219 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 SMG1P2-201ENST00000566127 4221 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC010894.1-201ENST00000313760 361 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 AC245036.1-201ENST00000391727 309 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AL033519.1-201ENST00000407266 307 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 NPM1P23-201ENST00000440193 849 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 CCNJP1-201ENST00000450600 1149 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC015524.1-201ENST00000491585 472 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AC022206.1-201ENST00000495947 347 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AP001960.1-201ENST00000506494 658 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC093664.1-201ENST00000511779 289 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.26□□□□□ -1.41
HNF4AP41235 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.26□□□□□ -1.41
HNF4AP41235 MIR6885-201ENST00000612241 66 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 AC119674.1-213ENST00000641177 1386 ntBASIC6.26□□□□□ -1.41
HNF4AP41235 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.26□□□□□ -1.41
HNF4AP41235 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HNF4AP41235 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.26□□□□□ -1.41
HNF4AP41235 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 CDC27P2-201ENST00000425026 1922 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
HNF4AP41235 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HNF4AP41235 AL391419.1-201ENST00000398901 1275 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 AL139184.1-202ENST00000422303 222 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 RPEP4-201ENST00000437636 602 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms