Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.37□□□□□ -1.39
FDFT1P37268 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
FDFT1P37268 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.37□□□□□ -1.39
FDFT1P37268 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 RNA5SP85-201ENST00000365378 119 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.37□□□□□ -1.39
FDFT1P37268 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FDFT1P37268 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FDFT1P37268 AC002127.1-201ENST00000421305 225 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 AC016027.5-201ENST00000427227 210 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 NPM1P25-201ENST00000429734 854 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.37□□□□□ -1.39
FDFT1P37268 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.37□□□□□ -1.39
FDFT1P37268 RN7SL502P-201ENST00000481857 290 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 CYP4F27P-201ENST00000514557 494 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.37□□□□□ -1.39
FDFT1P37268 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.37□□□□□ -1.39
FDFT1P37268 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.37□□□□□ -1.39
FDFT1P37268 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.37□□□□□ -1.39
FDFT1P37268 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 AC037479.1-201ENST00000558361 625 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.37□□□□□ -1.39
FDFT1P37268 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.37□□□□□ -1.39
FDFT1P37268 AL390877.1-201ENST00000605704 214 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
FDFT1P37268 AC016542.2-201ENST00000624201 619 ntBASIC6.37□□□□□ -1.39
FDFT1P37268 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FDFT1P37268 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FDFT1P37268 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.37□□□□□ -1.39
FDFT1P37268 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
FDFT1P37268 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.36□□□□□ -1.39
FDFT1P37268 AC009135.2-201ENST00000624136 1768 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AL359091.1-201ENST00000449048 1734 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AC078880.4-201ENST00000617627 1749 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FDFT1P37268 ARSFP1-201ENST00000398758 477 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AL121835.1-201ENST00000404250 354 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.36□□□□□ -1.39
FDFT1P37268 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
FDFT1P37268 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
FDFT1P37268 OR6R1P-201ENST00000431838 940 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.36□□□□□ -1.39
FDFT1P37268 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.36□□□□□ -1.39
FDFT1P37268 SLC25A51P1-201ENST00000468432 871 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 RPL12P31-201ENST00000478433 450 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 MTCO1P55-201ENST00000489829 745 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AC018639.1-201ENST00000492994 442 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.36□□□□□ -1.39
FDFT1P37268 KHDC1P1-201ENST00000511053 508 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.36□□□□□ -1.39
FDFT1P37268 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 IGKV2-19-201ENST00000518132 283 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.36□□□□□ -1.39
FDFT1P37268 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.36□□□□□ -1.39
FDFT1P37268 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.36□□□□□ -1.39
FDFT1P37268 MIR4732-201ENST00000581873 76 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 AC027334.1-201ENST00000603257 310 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.36□□□□□ -1.39
FDFT1P37268 AC010998.3-201ENST00000613871 631 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.36□□□□□ -1.39
FDFT1P37268 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 AL359976.1-201ENST00000418655 3528 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FDFT1P37268 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FDFT1P37268 AL161901.1-201ENST00000624954 3425 ntBASIC6.36□□□□□ -1.39
FDFT1P37268 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.36□□□□□ -1.39
FDFT1P37268 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FDFT1P37268 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FDFT1P37268 AC217777.1-201ENST00000570034 1471 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.35□□□□□ -1.39
FDFT1P37268 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.35□□□□□ -1.39
FDFT1P37268 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FDFT1P37268 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FDFT1P37268 RN7SKP257-201ENST00000364525 309 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 RNU1-59P-201ENST00000364829 162 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 SNORA43.1-201ENST00000364863 140 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 RPL23AP17-201ENST00000401064 499 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.35□□□□□ -1.39
FDFT1P37268 DHFRP2-201ENST00000414224 547 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.35□□□□□ -1.39
FDFT1P37268 AL360013.1-201ENST00000419031 858 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.35□□□□□ -1.39
FDFT1P37268 AC021876.1-201ENST00000425959 359 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 SOCS5P1-201ENST00000440415 949 ntBASIC6.35□□□□□ -1.39
FDFT1P37268 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.35□□□□□ -1.39
FDFT1P37268 AC112187.1-201ENST00000455837 479 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms