Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RN7SKP198-201ENST00000459286 306 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 RN7SL372P-201ENST00000461982 298 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 AC114728.1-201ENST00000488289 483 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.67□□□□□ -1.34
CTNNA1P35221 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AC100832.2-201ENST00000582080 776 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 MIR4420-201ENST00000583944 77 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AL021368.3-201ENST00000607119 578 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.67□□□□□ -1.34
CTNNA1P35221 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTNNA1P35221 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.67□□□□□ -1.34
CTNNA1P35221 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTNNA1P35221 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
CTNNA1P35221 AP000550.3-201ENST00000637734 379 ntBASIC6.67□□□□□ -1.34
CTNNA1P35221 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTNNA1P35221 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CTNNA1P35221 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.67□□□□□ -1.34
CTNNA1P35221 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTNNA1P35221 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTNNA1P35221 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.67□□□□□ -1.34
CTNNA1P35221 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.67□□□□□ -1.34
CTNNA1P35221 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTNNA1P35221 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.66□□□□□ -1.34
CTNNA1P35221 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 OR7A2P-201ENST00000304105 930 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 RN7SKP281-201ENST00000410472 352 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AC007562.1-201ENST00000421819 517 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AL672212.1-201ENST00000422246 400 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AC023274.2-201ENST00000445264 521 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.66□□□□□ -1.34
CTNNA1P35221 AL133480.2-201ENST00000456723 487 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AKR1D1P1-201ENST00000457236 936 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AC093870.1-201ENST00000506837 213 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.66□□□□□ -1.34
CTNNA1P35221 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CTNNA1P35221 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.66□□□□□ -1.34
CTNNA1P35221 AC006120.1-201ENST00000579375 546 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CTNNA1P35221 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.66□□□□□ -1.34
CTNNA1P35221 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.66□□□□□ -1.34
CTNNA1P35221 AL352984.2-201ENST00000611153 546 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 MIR8082-201ENST00000612488 81 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.66□□□□□ -1.34
CTNNA1P35221 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CTNNA1P35221 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 AC233968.1-201ENST00000611212 1300 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CTNNA1P35221 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.66□□□□□ -1.34
CTNNA1P35221 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 AC005702.3-201ENST00000585345 1447 ntBASIC6.66□□□□□ -1.34
CTNNA1P35221 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CTNNA1P35221 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CTNNA1P35221 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CTNNA1P35221 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CTNNA1P35221 SNORD16-201ENST00000362803 99 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 SNORD35A-201ENST00000363389 86 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AC026310.1-201ENST00000396004 378 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 RPL23AP17-201ENST00000401064 499 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 MRPL32P1-201ENST00000406301 247 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AL353133.1-201ENST00000407695 401 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL157884.1-201ENST00000424561 454 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 TRGV7-201ENST00000427089 353 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL590399.4-201ENST00000436561 601 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA1P35221 COL11A2P1-205ENST00000441798 676 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AC079922.1-201ENST00000443291 359 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL161722.1-201ENST00000446972 1032 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AL451063.1-201ENST00000450164 1133 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.65□□□□□ -1.34
CTNNA1P35221 SNORA81.2-201ENST00000516868 170 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CTNNA1P35221 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL133399.1-201ENST00000527476 298 ntBASIC6.65□□□□□ -1.34
CTNNA1P35221 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CTNNA1P35221 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.65□□□□□ -1.34
CTNNA1P35221 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA1P35221 AC135626.1-201ENST00000556983 435 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms