Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 AP006587.5-201ENST00000532033 739 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AC022880.1-201ENST00000534017 973 ntBASIC8.32□□□□□ -1.08
RFX1P22670 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC8.32□□□□□ -1.08
RFX1P22670 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.32□□□□□ -1.08
RFX1P22670 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
RFX1P22670 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 ISCA1P3-201ENST00000577104 373 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.32□□□□□ -1.08
RFX1P22670 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 AC090582.1-201ENST00000636321 199 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 PRNCR1-201ENST00000635449 12727 ntBASIC8.32□□□□□ -1.08
RFX1P22670 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.31□□□□□ -1.08
RFX1P22670 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
RFX1P22670 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RFX1P22670 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.31□□□□□ -1.08
RFX1P22670 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 AL078595.2-201ENST00000605309 1780 ntBASIC8.31□□□□□ -1.08
RFX1P22670 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 MFSD8-227ENST00000641393 4069 ntBASIC8.31□□□□□ -1.08
RFX1P22670 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 SNORA51.7-201ENST00000384171 134 ntBASIC8.31□□□□□ -1.08
RFX1P22670 Y_RNA.559-201ENST00000384686 107 ntBASIC8.31□□□□□ -1.08
RFX1P22670 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.31□□□□□ -1.08
RFX1P22670 RPS27AP11-201ENST00000402798 447 ntBASIC8.31□□□□□ -1.08
RFX1P22670 VTA1P1-201ENST00000414044 866 ntBASIC8.31□□□□□ -1.08
RFX1P22670 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 AL034379.1-201ENST00000423216 253 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.31□□□□□ -1.08
RFX1P22670 RPSAP49-201ENST00000445182 886 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.31□□□□□ -1.08
RFX1P22670 AC084754.1-201ENST00000463466 464 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.31□□□□□ -1.08
RFX1P22670 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 RPL23AP37-201ENST00000479658 549 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC104971.1-201ENST00000495117 578 ntBASIC8.31□□□□□ -1.08
RFX1P22670 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.31□□□□□ -1.08
RFX1P22670 AC104090.1-201ENST00000506341 1171 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC008885.2-201ENST00000509506 930 ntBASIC8.31□□□□□ -1.08
RFX1P22670 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.31□□□□□ -1.08
RFX1P22670 AC105185.1-201ENST00000518705 535 ntBASIC8.31□□□□□ -1.08
RFX1P22670 IGLV10-67-201ENST00000519446 325 ntBASIC8.31□□□□□ -1.08
RFX1P22670 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 AP004833.3-201ENST00000531893 322 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.31□□□□□ -1.08
RFX1P22670 AC016144.1-201ENST00000548175 1087 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 HNRNPCP1-201ENST00000556181 766 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC010546.1-201ENST00000569391 485 ntBASIC8.31□□□□□ -1.08
RFX1P22670 MTCO1P40-201ENST00000574371 625 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC008759.1-201ENST00000589783 983 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.31□□□□□ -1.08
RFX1P22670 NTAN1P1-201ENST00000603150 646 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL109936.2-201ENST00000605350 650 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL021997.1-201ENST00000605757 193 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL021368.3-201ENST00000607119 578 ntBASIC8.31□□□□□ -1.08
RFX1P22670 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 AC007204.2-201ENST00000615022 616 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL353898.2-201ENST00000623000 255 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AL359740.1-201ENST00000624340 592 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AC007494.3-201ENST00000624660 743 ntBASIC8.31□□□□□ -1.08
RFX1P22670 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RFX1P22670 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RFX1P22670 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.31□□□□□ -1.08
RFX1P22670 AP000526.1-201ENST00000603308 1388 ntBASIC8.31□□□□□ -1.08
RFX1P22670 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
RFX1P22670 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 AC023818.2-201ENST00000623817 2304 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms