Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC092821.2-201ENST00000545710 2042 ntBASIC6.82□□□□□ -1.32
RB1P06400 MIPEPP2-201ENST00000422560 1819 ntBASIC6.82□□□□□ -1.32
RB1P06400 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 RARSP1-201ENST00000542842 1418 ntBASIC6.82□□□□□ -1.32
RB1P06400 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.82□□□□□ -1.32
RB1P06400 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.82□□□□□ -1.32
RB1P06400 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RB1P06400 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RB1P06400 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 AP005139.1-201ENST00000580702 1647 ntBASIC6.81□□□□□ -1.32
RB1P06400 SAGE3P-201ENST00000619800 1635 ntBASIC6.81□□□□□ -1.32
RB1P06400 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RB1P06400 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 BRWD1P3-201ENST00000428816 390 ntBASIC6.81□□□□□ -1.32
RB1P06400 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 AL161636.2-201ENST00000445179 927 ntBASIC6.81□□□□□ -1.32
RB1P06400 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 RPS4XP14-201ENST00000493072 781 ntBASIC6.81□□□□□ -1.32
RB1P06400 AC022206.1-201ENST00000495947 347 ntBASIC6.81□□□□□ -1.32
RB1P06400 MTND6P8-201ENST00000503471 522 ntBASIC6.81□□□□□ -1.32
RB1P06400 AL158068.1-201ENST00000506116 616 ntBASIC6.81□□□□□ -1.32
RB1P06400 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 AC083906.1-201ENST00000509298 406 ntBASIC6.81□□□□□ -1.32
RB1P06400 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 OR5H7P-201ENST00000514084 930 ntBASIC6.81□□□□□ -1.32
RB1P06400 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.81□□□□□ -1.32
RB1P06400 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 AC093524.1-201ENST00000564266 1094 ntBASIC6.81□□□□□ -1.32
RB1P06400 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.81□□□□□ -1.32
RB1P06400 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.81□□□□□ -1.32
RB1P06400 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.81□□□□□ -1.32
RB1P06400 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RB1P06400 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 AC092725.2-201ENST00000567658 1389 ntBASIC6.81□□□□□ -1.32
RB1P06400 AC027279.1-201ENST00000568885 4284 ntBASIC6.81□□□□□ -1.32
RB1P06400 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.81□□□□□ -1.32
RB1P06400 AC018717.1-201ENST00000457712 1505 ntBASIC6.81□□□□□ -1.32
RB1P06400 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RB1P06400 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 TMSB4XP4-201ENST00000323496 618 ntBASIC6.8□□□□□ -1.32
RB1P06400 RNA5SP110-201ENST00000362638 115 ntBASIC6.8□□□□□ -1.32
RB1P06400 RNA5SP477-201ENST00000362639 119 ntBASIC6.8□□□□□ -1.32
RB1P06400 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.8□□□□□ -1.32
RB1P06400 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 TET1P1-201ENST00000426627 2301 ntBASIC6.8□□□□□ -1.32
RB1P06400 AC091390.2-201ENST00000432573 374 ntBASIC6.8□□□□□ -1.32
RB1P06400 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.8□□□□□ -1.32
RB1P06400 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.8□□□□□ -1.32
RB1P06400 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.8□□□□□ -1.32
RB1P06400 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.8□□□□□ -1.32
RB1P06400 AL133351.3-201ENST00000454998 193 ntBASIC6.8□□□□□ -1.32
RB1P06400 RPL5P12-201ENST00000477071 851 ntBASIC6.8□□□□□ -1.32
RB1P06400 RPL23AP68-201ENST00000480924 445 ntBASIC6.8□□□□□ -1.32
RB1P06400 RN7SL714P-201ENST00000487050 298 ntBASIC6.8□□□□□ -1.32
RB1P06400 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.8□□□□□ -1.32
RB1P06400 RN7SKP238-201ENST00000516483 249 ntBASIC6.8□□□□□ -1.32
RB1P06400 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.8□□□□□ -1.32
RB1P06400 AC090616.1-201ENST00000583895 447 ntBASIC6.8□□□□□ -1.32
RB1P06400 NPIPB1P-202ENST00000588786 828 ntBASIC6.8□□□□□ -1.32
RB1P06400 AC005332.4-201ENST00000592752 579 ntBASIC6.8□□□□□ -1.32
RB1P06400 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.8□□□□□ -1.32
RB1P06400 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 AC018690.1-201ENST00000608144 626 ntBASIC6.8□□□□□ -1.32
RB1P06400 AC034229.6-201ENST00000623704 224 ntBASIC6.8□□□□□ -1.32
RB1P06400 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.8□□□□□ -1.32
RB1P06400 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.8□□□□□ -1.32
RB1P06400 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms