Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC023490.2-201ENST00000359859 470 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 RNU1-134P-201ENST00000362935 165 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CHRNA1P02708 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AL512422.1-201ENST00000407033 553 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 RN7SKP206-201ENST00000410823 293 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 CDY17P-201ENST00000414121 1282 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 PPIAP10-201ENST00000438675 458 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.87□□□□□ -1.31
CHRNA1P02708 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC011411.1-201ENST00000509592 876 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 MTATP6P1-201ENST00000514057 681 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC022826.1-201ENST00000519383 805 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.87□□□□□ -1.31
CHRNA1P02708 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AL121579.2-201ENST00000555466 590 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 OR7A11P-201ENST00000597719 953 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC139493.1-201ENST00000604368 397 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 MIR7159-201ENST00000620587 66 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AL132640.3-201ENST00000630473 177 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AC073488.3-201ENST00000631611 778 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.87□□□□□ -1.31
CHRNA1P02708 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.87□□□□□ -1.31
CHRNA1P02708 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CHRNA1P02708 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 Z93929.1-201ENST00000418200 1475 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.86□□□□□ -1.31
CHRNA1P02708 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.86□□□□□ -1.31
CHRNA1P02708 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 RNFT1P3-201ENST00000340898 1052 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 RN7SKP69-201ENST00000365390 305 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 RPL23AP19-201ENST00000436229 369 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 NPM1P27-201ENST00000502784 830 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 PSMA2P2-201ENST00000504319 686 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 SNORA58-201ENST00000505219 137 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 AC010343.2-201ENST00000510162 224 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 AC090958.1-201ENST00000511122 351 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 RNA5SP434-201ENST00000516647 121 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 RNA5SP271-201ENST00000516700 88 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.86□□□□□ -1.31
CHRNA1P02708 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.86□□□□□ -1.31
CHRNA1P02708 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.86□□□□□ -1.31
CHRNA1P02708 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.86□□□□□ -1.31
CHRNA1P02708 AC103703.1-201ENST00000634783 663 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 MIR4302-201ENST00000638058 60 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.86□□□□□ -1.31
CHRNA1P02708 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHRNA1P02708 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.86□□□□□ -1.31
CHRNA1P02708 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHRNA1P02708 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CHRNA1P02708 PSG10P-201ENST00000501199 1500 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 AC010401.2-201ENST00000575137 4934 ntBASIC6.86□□□□□ -1.31
CHRNA1P02708 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms