Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.79□□□□□ -1.48
ZIC3O60481 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC009032.1-201ENST00000617574 431 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.79□□□□□ -1.48
ZIC3O60481 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AL591848.4-201ENST00000567832 3472 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC125238.2-201ENST00000430003 1440 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 AL589993.1-201ENST00000407450 2524 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.79□□□□□ -1.48
ZIC3O60481 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.78□□□□□ -1.48
ZIC3O60481 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 Y_RNA.110-201ENST00000363220 99 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 RNA5SP350-201ENST00000363298 111 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 AL139039.2-201ENST00000407436 479 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 OSTCP4-201ENST00000424397 449 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 PARP4P1-201ENST00000435945 2337 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 TIMM8BP2-201ENST00000445940 251 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.78□□□□□ -1.48
ZIC3O60481 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.78□□□□□ -1.48
ZIC3O60481 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 RN7SL552P-201ENST00000462094 276 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.78□□□□□ -1.48
ZIC3O60481 RPL12P31-201ENST00000478433 450 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 ATG10-AS1-201ENST00000504846 648 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC112184.1-201ENST00000505179 312 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC096754.1-201ENST00000508904 818 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 IGKV1D-22-201ENST00000518953 324 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC104997.1-201ENST00000519761 717 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC019227.1-201ENST00000526902 510 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 AL121579.2-201ENST00000555466 590 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.78□□□□□ -1.48
ZIC3O60481 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 AC005632.2-201ENST00000564271 828 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 OR1E3-201ENST00000575608 948 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 RN7SL230P-201ENST00000580835 303 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AC005332.4-201ENST00000592752 579 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.78□□□□□ -1.48
ZIC3O60481 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.78□□□□□ -1.48
ZIC3O60481 OR8A1-204ENST00000642111 1145 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
ZIC3O60481 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 AC022905.1-201ENST00000503430 3048 ntBASIC5.78□□□□□ -1.48
ZIC3O60481 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ZIC3O60481 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.78□□□□□ -1.48
ZIC3O60481 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.78□□□□□ -1.48
ZIC3O60481 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZIC3O60481 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.77□□□□□ -1.48
ZIC3O60481 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.77□□□□□ -1.49
ZIC3O60481 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.77□□□□□ -1.49
ZIC3O60481 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZIC3O60481 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms