Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OR10D1P-201ENST00000355343 936 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM1O00151 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PDLIM1O00151 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM1O00151 RN7SKP91-201ENST00000410852 288 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 PAICSP2-201ENST00000429118 1150 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 AC083855.1-201ENST00000440041 258 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM1O00151 SCARNA11.1-201ENST00000516918 132 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM1O00151 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM1O00151 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.09□□□□□ -1.43
PDLIM1O00151 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PDLIM1O00151 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.09□□□□□ -1.44
PDLIM1O00151 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.09□□□□□ -1.44
PDLIM1O00151 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM1O00151 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM1O00151 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
PDLIM1O00151 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.09□□□□□ -1.44
PDLIM1O00151 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM1O00151 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDLIM1O00151 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDLIM1O00151 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM1O00151 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM1O00151 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDLIM1O00151 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC091492.1-201ENST00000419844 272 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 RPS7P12-201ENST00000422385 582 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 PSMD8P1-201ENST00000436275 769 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 GAPDHP20-201ENST00000444107 1007 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM1O00151 RN7SL492P-201ENST00000460700 295 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC106800.3-201ENST00000511389 308 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 MTCYBP44-201ENST00000514835 823 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM1O00151 OR4A40P-201ENST00000533878 948 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 AC140063.1-201ENST00000541343 259 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.08□□□□□ -1.44
PDLIM1O00151 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 AL445649.1-201ENST00000615941 691 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 MRPL57P1-201ENST00000621486 265 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 AC019072.1-201ENST00000604535 1551 ntBASIC6.08□□□□□ -1.44
PDLIM1O00151 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM1O00151 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM1O00151 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM1O00151 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM1O00151 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDLIM1O00151 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM1O00151 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 RN7SKP69-201ENST00000365390 305 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM1O00151 LDHAP5-201ENST00000394996 622 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 RPLP1P10-201ENST00000413972 339 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 AL158827.1-201ENST00000416300 391 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM1O00151 RPS10P14-201ENST00000440748 502 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM1O00151 UOX-201ENST00000471089 899 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms