Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 COX7BP2-201ENST00000437976 242 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC005297.1-201ENST00000444765 862 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 CASP3P1-201ENST00000446037 609 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC118758.1-202ENST00000454719 225 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 RN7SL83P-201ENST00000468131 297 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 RPL23AP44-201ENST00000482216 473 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 PGBD4P4-201ENST00000509673 613 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC109464.2-201ENST00000510242 943 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 RNA5SP518-201ENST00000515957 119 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC109635.3-201ENST00000529536 185 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 OR4A6P-201ENST00000534364 970 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC121758.1-202ENST00000556917 658 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC022662.1-201ENST00000580252 331 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AL049840.6-201ENST00000604583 345 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 U47924.1-201ENST00000606539 434 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC005609.2-201ENST00000623320 592 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 CR848007.1-201ENST00000442354 1699 ntBASIC9.02□□□□□ -0.96
ZC3H4Q9UPT8 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
ZC3H4Q9UPT8 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC9.02□□□□□ -0.96
ZC3H4Q9UPT8 AC016582.1-202ENST00000636341 2982 ntBASIC9.02□□□□□ -0.96
ZC3H4Q9UPT8 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL359694.2-201ENST00000567753 1615 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 PTER-203ENST00000423462 3212 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 EEF1A1P30-201ENST00000429708 1315 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC096745.2-201ENST00000627783 1914 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RNU6-252P-201ENST00000363232 107 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RNU6-236P-201ENST00000363886 106 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 SRI-202ENST00000394641 653 ntTSL 2 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RN7SKP273-201ENST00000411392 314 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 MTCO2P34-201ENST00000421994 607 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 OFD1P13Y-201ENST00000431179 1232 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 OR6R1P-201ENST00000431838 940 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RPS24P1-201ENST00000438550 371 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 FUNDC2P2-202ENST00000443452 493 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 MTCO1P19-201ENST00000443487 500 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 MRPL35P2-201ENST00000448009 511 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RPS7P10-201ENST00000464254 603 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC091965.2-201ENST00000512324 613 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RNU6-943P-201ENST00000516960 98 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 IGLVIV-59-201ENST00000520218 250 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AP001803.1-201ENST00000525668 147 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AKIRIN1P1-201ENST00000547384 544 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 FCF1-203ENST00000553615 954 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 RN7SL622P-201ENST00000585292 275 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC079089.3-201ENST00000603094 673 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AL161729.2-201ENST00000605700 456 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC019080.5-201ENST00000624891 757 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms