Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL359633.1-201ENST00000421403 310 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 TNPO1P1-201ENST00000423641 1138 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 ANKRD54P1-201ENST00000433115 471 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 RPL14P5-201ENST00000436474 730 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 MTATP6P13-201ENST00000438531 667 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 SEPT14P24-201ENST00000447236 180 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 VN1R32P-201ENST00000452234 905 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 RPL36AP55-201ENST00000454114 305 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 CBX5P1-201ENST00000468470 561 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 RPL23AP44-201ENST00000482216 473 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC016687.1-201ENST00000482574 353 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC073648.3-201ENST00000504939 925 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 NDUFB4P12-201ENST00000513465 390 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 MTND4LP18-201ENST00000526864 291 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 NDUFA3P4-201ENST00000560814 250 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AGGF1P4-201ENST00000568249 801 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC090616.2-202ENST00000584248 222 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC078795.2-201ENST00000602835 1252 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL139286.2-201ENST00000606838 396 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC027271.1-201ENST00000610270 610 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC116165.3-201ENST00000614524 400 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL121890.3-201ENST00000618494 516 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC078909.2-201ENST00000620584 398 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC027506.1-201ENST00000621395 198 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC130456.6-201ENST00000623745 765 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC119674.1-201ENST00000641611 1210 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC005832.2-201ENST00000538921 1430 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC010886.1-201ENST00000437380 2869 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 RNU6-517P-201ENST00000384362 110 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 RAB5CP1-201ENST00000395972 580 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 MTCO1P56-201ENST00000401674 224 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AL390774.1-201ENST00000411924 246 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AL157698.1-201ENST00000415190 1011 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 RPL30P16-201ENST00000419341 429 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 OR6R1P-201ENST00000431838 940 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 RPL5P4-201ENST00000434805 886 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 RPL29P7-201ENST00000440227 457 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 TAF9P1-201ENST00000445421 515 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 CASP3P1-201ENST00000446037 609 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 CYCSP44-201ENST00000448560 313 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 TAF9P2-201ENST00000454958 515 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 RPL7P32-201ENST00000457119 744 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 NMNAT1P3-201ENST00000457517 888 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC040975.1-201ENST00000472104 316 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC090114.3-201ENST00000479267 829 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTN3Q9P232 MTATP6P1-201ENST00000514057 681 ntBASIC7.88□□□□□ -1.15
CNTN3Q9P232 RNU6-1178P-201ENST00000516674 107 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms