Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 SNX6P1-201ENST00000601728 1224 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC022001.1-201ENST00000605193 268 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL096803.3-201ENST00000609032 532 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC007347.2-201ENST00000623044 180 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC006927.2-201ENST00000639256 389 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC104162.1-201ENST00000430831 2382 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 WASF5P-205ENST00000428639 1455 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SNORD116-4-201ENST00000384733 96 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 ZNF37CP-201ENST00000406795 241 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 RN7SKP271-201ENST00000410528 320 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 OR52S1P-201ENST00000427016 937 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 MTCO3P16-201ENST00000454456 754 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SNORA35.1-201ENST00000458908 128 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 RN7SL776P-201ENST00000493390 268 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC134050.1-201ENST00000495088 933 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 LAMTOR3P2-201ENST00000504479 232 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC093325.1-201ENST00000508378 326 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 HMGB1P47-201ENST00000511281 589 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 OR4C1P-201ENST00000530880 937 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 OR7E128P-201ENST00000532736 1024 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 OR4N3P-201ENST00000559395 818 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 UBE2CP4-201ENST00000561405 535 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC015818.6-201ENST00000584274 634 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC111186.1-201ENST00000604684 130 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL136139.1-201ENST00000605568 222 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC243830.2-201ENST00000618067 630 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC135068.4-201ENST00000622949 925 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC073862.4-201ENST00000622982 854 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL590396.3-201ENST00000636334 300 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 FO082842.1-201ENST00000423552 1370 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 AC096656.1-201ENST00000623826 1364 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 DDX43P1-201ENST00000510713 1763 ntBASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
FOXP3Q9BZS1 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AL596244.1-201ENST00000567068 3779 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms