Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC024267.2-201ENST00000582737 417 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 U1.25-201ENST00000614085 162 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 U1.34-201ENST00000618578 162 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 U1.31-201ENST00000620022 160 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AL359976.1-201ENST00000418655 3528 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RSPO3Q9BXY4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 PTCD2P2-201ENST00000415579 1095 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 BMP6P1-201ENST00000431230 679 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 USP24P1-201ENST00000433802 779 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC094019.1-201ENST00000434678 472 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC096632.2-201ENST00000438139 1239 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC234771.4-201ENST00000441416 730 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC114728.1-201ENST00000488289 483 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC139713.1-202ENST00000512366 460 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC036111.2-201ENST00000533247 901 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC138207.8-204ENST00000579588 527 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 MIR4732-201ENST00000581873 76 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC036176.3-201ENST00000602456 418 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC007114.2-201ENST00000576014 4281 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AL161901.1-201ENST00000624954 3425 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 AC119674.1-202ENST00000641333 1860 ntBASIC5.71□□□□□ -1.5
RSPO3Q9BXY4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms