Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC008429.4-201ENST00000521201 182 ntBASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC090241.1-201ENST00000587732 621 ntBASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AL137067.2-201ENST00000621202 131 ntBASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.21□□□□□ -1.58
HDHD3Q9BSH5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AL133243.2-201ENST00000610331 1621 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AP002833.3-201ENST00000625075 2265 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AL096800.1-201ENST00000405326 893 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 RNA5SP155-201ENST00000411154 129 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC092646.1-201ENST00000427142 901 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AL365220.1-201ENST00000432923 399 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 HMGN1P32-201ENST00000441744 256 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 MORF4-201ENST00000447135 971 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 SLAMF6P1-201ENST00000451067 602 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AL354872.1-201ENST00000456361 967 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 RN7SL369P-201ENST00000477138 299 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC023080.1-201ENST00000551663 931 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 RN7SL32P-201ENST00000580514 281 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 OR7E19P-202ENST00000589942 844 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC012511.1-201ENST00000608140 449 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC022106.1-201ENST00000612834 766 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC024587.1-201ENST00000505925 2157 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AC027575.3-201ENST00000583058 2747 ntBASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDHD3Q9BSH5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL117344.1-201ENST00000407196 616 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 BMS1P11-201ENST00000442351 885 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 GAPDHP23-201ENST00000444823 993 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 COX4I1P2-201ENST00000447446 547 ntBASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.19□□□□□ -1.58
HDHD3Q9BSH5 BMS1P9-201ENST00000457640 885 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms