Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 uc_338.5-201ENST00000611839 155 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 MIR6892-201ENST00000612346 115 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC143336.1-201ENST00000614164 836 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 GLTP-206ENST00000617457 969 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC005609.2-201ENST00000623320 592 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AL683826.1-201ENST00000624104 627 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 MKKS-204ENST00000639674 192 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 MTND4P14-201ENST00000435799 1354 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 UGT2B25P-201ENST00000511504 1586 ntBASIC7.92□□□□□ -1.14
USB1Q9BQ65 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USB1Q9BQ65 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
USB1Q9BQ65 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 SPATA2P1-201ENST00000431223 2055 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 OR4A15-201ENST00000314706 1035 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 Y_RNA.202-201ENST00000364083 110 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 Y_RNA.315-201ENST00000365117 102 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 RNU6-452P-201ENST00000384406 107 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 RN7SKP140-201ENST00000411196 284 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 RPSAP63-201ENST00000412013 888 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AL353678.1-201ENST00000422735 741 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 HSPB1P1-201ENST00000423240 256 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 RPL7P12-201ENST00000446719 750 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 RN7SL337P-201ENST00000462468 301 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ENO1P3-201ENST00000484903 1224 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 RPL36AP51-201ENST00000487216 318 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 RN7SL580P-201ENST00000492489 287 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 RACK1-211ENST00000504726 388 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC021146.2-201ENST00000504736 556 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 BTG4P1-201ENST00000510421 183 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 RNU7-30P-201ENST00000516835 62 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 SNORA81.2-201ENST00000516868 170 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AP000866.3-201ENST00000534607 433 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC008055.1-201ENST00000547032 609 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 ILF2P2-201ENST00000547482 1117 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC245014.2-201ENST00000603689 287 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC010680.4-201ENST00000605334 543 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC246785.4-201ENST00000605374 287 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms