Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 RPL21P42-201ENST00000488408 464 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 MTCO1P55-201ENST00000489829 745 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 SETP17-201ENST00000534163 817 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 FAM30C-201ENST00000561158 410 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AP000919.1-201ENST00000582850 985 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC024255.1-201ENST00000614376 102 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 AC005858.3-201ENST00000624756 589 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.88□□□□□ -1.63
VGLL1Q99990 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC005725.1-201ENST00000577346 2607 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VGLL1Q99990 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 RN7SKP237-201ENST00000364663 301 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VGLL1Q99990 DHFRP5-201ENST00000406944 564 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 RN7SKP117-201ENST00000410175 264 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC091492.1-201ENST00000419844 272 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VGLL1Q99990 ETF1P1-206ENST00000427296 984 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 FECHP1-201ENST00000431896 1214 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 XKRYP6-201ENST00000440468 1116 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VGLL1Q99990 XKRYP3-201ENST00000442113 1116 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 VN1R38P-201ENST00000450265 887 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.88□□□□□ -1.63
VGLL1Q99990 RPS4XP19-201ENST00000460237 736 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AF305872.1-201ENST00000485217 471 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AGGF1P3-201ENST00000493675 1213 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC022206.1-201ENST00000495947 347 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AL390198.2-201ENST00000510553 222 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 CCNHP1-201ENST00000513311 678 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC007068.2-201ENST00000543168 395 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AL121579.2-201ENST00000555466 590 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
VGLL1Q99990 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC4.88□□□□□ -1.63
VGLL1Q99990 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VGLL1Q99990 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.88□□□□□ -1.63
VGLL1Q99990 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.88□□□□□ -1.63
VGLL1Q99990 RPS27AP19-201ENST00000597285 458 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC099777.1-201ENST00000603779 1070 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 KATNBL1P1-201ENST00000605192 748 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC116165.3-201ENST00000614524 400 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC007347.2-201ENST00000623044 180 ntBASIC4.88□□□□□ -1.63
VGLL1Q99990 AC061999.1-201ENST00000624454 177 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms