Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 MTND1P27-201ENST00000451117 902 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 BZW1P1-201ENST00000454901 1240 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 RPL5P16-201ENST00000471467 790 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AGGF1P3-201ENST00000493675 1213 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC010627.1-201ENST00000503819 1294 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC021106.1-201ENST00000509020 1058 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 EEF1A1P37-201ENST00000522748 715 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 OR9G2P-201ENST00000533326 880 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC106785.3-201ENST00000564064 847 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AP003115.1-201ENST00000569849 463 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 MIR4732-201ENST00000581873 76 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 CR589904.2-201ENST00000612533 440 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC048341.3-201ENST00000619323 491 ntBASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CDK5RAP1Q96SZ6 AC093278.2-201ENST00000564956 2485 ntBASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 MTND4P5-201ENST00000435821 1374 ntBASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 MTND4P4-201ENST00000439033 1366 ntBASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.96□□□□□ -1.29
CDK5RAP1Q96SZ6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 MIR191-201ENST00000384873 92 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 OR1F12-201ENST00000402365 945 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 VIM2P-201ENST00000402383 1294 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AL049697.3-201ENST00000406493 982 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 RN7SKP146-201ENST00000410242 334 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 UBTFL2-201ENST00000411859 1191 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 RANP6-201ENST00000413691 644 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 MTCO2P23-201ENST00000425216 680 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 RPP40P1-201ENST00000426762 456 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 GAPDHP37-201ENST00000442317 968 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC096992.1-201ENST00000459808 709 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 RN7SL834P-201ENST00000461450 286 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC015524.1-201ENST00000491585 472 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC138517.1-201ENST00000515724 568 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AP003033.1-201ENST00000527244 415 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 MIR212-201ENST00000586026 110 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL29P33-201ENST00000587474 316 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 DUXAP3-201ENST00000603616 594 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC114477.1-201ENST00000605097 605 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AC005332.10-201ENST00000612725 619 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AP000577.1-201ENST00000624366 878 ntBASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms