Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU6-889P-201ENST00000517189 103 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC103833.1-201ENST00000517442 172 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC010476.1-201ENST00000519111 851 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 MTCYBP20-201ENST00000524239 1129 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AP001496.3-201ENST00000580230 913 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 MRPS35P3-201ENST00000603189 709 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC025588.2-201ENST00000604851 466 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC015982.1-201ENST00000608113 465 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AL445649.1-201ENST00000615941 691 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC026124.2-201ENST00000621847 656 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC098679.5-201ENST00000624394 571 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC083865.1-201ENST00000636634 831 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AP002364.1-201ENST00000623330 3386 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC021755.1-201ENST00000559747 1447 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AL358913.2-201ENST00000553881 1548 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RNU1-5P-201ENST00000362684 144 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RPL5P5-201ENST00000392009 893 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 OR8V1P-201ENST00000395193 873 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RPL24P7-201ENST00000399435 453 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC119751.3-201ENST00000399720 670 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RN7SKP97-201ENST00000410966 333 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RPL5P34-201ENST00000426545 891 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 GAPDHP19-201ENST00000431768 1005 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 RPL7AP71-201ENST00000451120 739 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC066616.1-201ENST00000486795 413 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC013283.1-201ENST00000557282 492 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC096708.2-201ENST00000577676 512 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC068790.6-201ENST00000602558 258 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 DEFB131E-202ENST00000602581 683 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AL133247.2-201ENST00000603236 482 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AL355333.1-201ENST00000605632 279 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC012213.4-201ENST00000606457 354 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AL049541.2-201ENST00000626377 555 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 TCP1P3-201ENST00000414406 1498 ntBASIC7.99□□□□□ -1.13
SYNGAP1Q96PV0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC104581.5-201ENST00000624171 7141 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms