Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 MIR6726-201ENST00000613751 61 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC007671.1-201ENST00000616957 830 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AL109924.4-201ENST00000623089 670 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AL035425.4-201ENST00000624509 1063 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC005725.1-201ENST00000577346 2607 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 CASC19-238ENST00000641523 1558 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPL18AP14-201ENST00000417685 526 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPL23AP85-201ENST00000421838 433 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC000089.1-201ENST00000424559 801 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 HMGB1P32-201ENST00000425971 565 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 GAPDHP33-201ENST00000443168 1013 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPS4XP19-201ENST00000460237 736 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RN7SL868P-201ENST00000485915 303 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPL7L1P7-201ENST00000509986 724 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 OR4A42P-201ENST00000531397 938 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AP000619.2-201ENST00000546014 969 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 RPS27AP19-201ENST00000597285 458 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC245052.7-201ENST00000601161 359 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC091133.5-201ENST00000603088 301 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 U1.34-201ENST00000618578 162 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.15□□□□□ -1.42
VPS33AQ96AX1 AL162377.2-201ENST00000624532 337 ntBASIC6.15□□□□□ -1.42
VPS33AQ96AX1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 PSMC1P4-201ENST00000515236 1327 ntBASIC6.15□□□□□ -1.43
VPS33AQ96AX1 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 AC093844.1-201ENST00000514910 1361 ntBASIC6.15□□□□□ -1.43
VPS33AQ96AX1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 AC074141.1-201ENST00000588129 2995 ntBASIC6.15□□□□□ -1.43
VPS33AQ96AX1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS33AQ96AX1 AC011503.2-201ENST00000594230 1500 ntBASIC6.15□□□□□ -1.43
VPS33AQ96AX1 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC092701.1-201ENST00000623627 1551 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 SAGE3P-201ENST00000619800 1635 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AL731532.1-201ENST00000623972 4236 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC024937.2-201ENST00000411669 1242 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 CYP4F30P-202ENST00000420048 405 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 PPIAP23-201ENST00000420099 497 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AL034379.1-201ENST00000423216 253 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 PUDPP2-201ENST00000431423 643 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC092967.1-201ENST00000449016 481 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC103563.5-201ENST00000455643 364 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms