Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RNA5SP350-201ENST00000363298 111 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC074375.1-201ENST00000372993 192 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 FDPSP5-201ENST00000399474 1057 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AL139135.1-201ENST00000412675 209 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RANP6-201ENST00000413691 644 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 UBE2V1P14-201ENST00000415815 558 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AL357078.2-201ENST00000416486 427 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RPS17P17-201ENST00000419392 409 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 UBE2V1P6-201ENST00000430840 422 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RPS7P4-201ENST00000444127 582 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AL845321.1-201ENST00000444603 348 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 ATG10-AS1-201ENST00000504846 648 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RN7SKP196-201ENST00000516267 345 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 OR4A40P-201ENST00000533878 948 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC005519.1-201ENST00000554490 601 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC011270.1-201ENST00000558606 583 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC010287.1-201ENST00000566916 357 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 PRELID3BP3-201ENST00000584963 545 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 RPL29P33-201ENST00000587474 316 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AL136520.1-201ENST00000600311 1322 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC040174.2-201ENST00000602701 465 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AL512413.1-201ENST00000606489 382 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AC135803.1-201ENST00000608748 565 ntBASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ATG4AQ8WYN0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC073365.1-203ENST00000641055 1992 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC092724.1-201ENST00000624623 3397 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AL139100.1-201ENST00000408001 498 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 RNA5SP251-201ENST00000410614 137 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 SFR1P2-201ENST00000421841 730 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC092106.2-201ENST00000436597 487 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AL356133.1-201ENST00000444762 372 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 RN7SL221P-201ENST00000466190 281 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC139272.1-201ENST00000505516 640 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC131392.1-201ENST00000506490 633 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 OR4H6P-201ENST00000563771 921 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC090616.1-201ENST00000583895 447 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms