Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC096921.2-201ENST00000561507 1916 ntBASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC71LQ8N9Z2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC007842.1-201ENST00000597336 2039 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 SNORD16-201ENST00000362803 99 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NPM1P31-201ENST00000399021 764 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 RN7SKP137-201ENST00000411074 307 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 RANP6-201ENST00000413691 644 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC000089.1-201ENST00000424559 801 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC114402.2-201ENST00000432760 643 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 RPS16P9-201ENST00000477220 427 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC010343.2-201ENST00000510162 224 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 CARSP2-201ENST00000520688 277 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 MIR4262-201ENST00000578394 54 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC027334.1-201ENST00000603257 310 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AL137246.1-201ENST00000607072 977 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC005858.3-201ENST00000624756 589 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC073488.9-201ENST00000631601 754 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 MTCO1P46-201ENST00000451639 1491 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 AC092701.1-201ENST00000623627 1551 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 GUCY1B2-204ENST00000531898 1979 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 LINC02019-201ENST00000608605 2060 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 BCORP1-203ENST00000513194 5093 ntBASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71LQ8N9Z2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 AL138847.1-201ENST00000258651 546 ntBASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 RNA5SP301-201ENST00000362537 121 ntBASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 RNA5SP355-201ENST00000365317 135 ntBASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 RNA5SP279-201ENST00000365513 117 ntBASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 RPSAP44-201ENST00000406712 884 ntBASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 AL662791.3-201ENST00000413771 776 ntBASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC71LQ8N9Z2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms