Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC018645.1-201ENST00000505003 109 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC010343.2-201ENST00000510162 224 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 CASP1P2-201ENST00000526830 1258 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AL133399.1-201ENST00000527476 298 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 TPRX1P1-201ENST00000557620 319 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 HMGN2P47-201ENST00000559378 272 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC009120.3-201ENST00000563335 499 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC233699.1-201ENST00000569955 1168 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 CCDC58P1-201ENST00000578567 430 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 SNORA74.4-201ENST00000607595 199 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC006511.3-201ENST00000624929 1783 ntBASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TTC9CQ8N5M4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 UBTFL2-201ENST00000411859 1191 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 PSMD8P1-201ENST00000436275 769 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC026782.2-201ENST00000510845 636 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 MIR4732-201ENST00000581873 76 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AL390877.1-201ENST00000605704 214 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AL008723.3-201ENST00000608926 449 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AL137246.2-201ENST00000613439 662 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 MIR6774-201ENST00000614651 70 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 AC011815.2-201ENST00000618230 2021 ntBASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TTC9CQ8N5M4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 AC005225.5-201ENST00000623547 2225 ntBASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 AC217777.1-201ENST00000570034 1471 ntBASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 LINC01616-201ENST00000561816 2280 ntBASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 NPM1P37-201ENST00000403105 874 ntBASIC5.01□□□□□ -1.61
TTC9CQ8N5M4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms