Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC004836.1-201ENST00000623032 634 ntBASIC6.79□□□□□ -1.32
CCDC38Q502W7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC38Q502W7 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CCDC38Q502W7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC38Q502W7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC38Q502W7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC38Q502W7 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC38Q502W7 ZNF806-201ENST00000438300 1774 ntBASIC6.79□□□□□ -1.32
CCDC38Q502W7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC38Q502W7 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC38Q502W7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC38Q502W7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC38Q502W7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC38Q502W7 MSL3P1-202ENST00000440028 1468 ntBASIC6.79□□□□□ -1.32
CCDC38Q502W7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 MIR365B-201ENST00000362317 111 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 RNA5SP302-201ENST00000364896 100 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 RNU1-46P-201ENST00000384425 164 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 CR848007.2-201ENST00000424918 787 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC009303.1-201ENST00000426307 352 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AL138479.1-201ENST00000426913 484 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AL590399.4-201ENST00000436561 601 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 CTSLP6-201ENST00000458273 1002 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 RN7SL492P-201ENST00000460700 295 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 RN7SL849P-201ENST00000485236 295 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 RN7SL868P-201ENST00000485915 303 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 MIR378C-201ENST00000578683 81 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC090241.1-201ENST00000587732 621 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AL078623.1-201ENST00000602702 907 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC106782.7-201ENST00000624024 418 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC133555.5-201ENST00000624430 418 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC140479.4-205ENST00000636339 820 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 AL163152.1-201ENST00000642001 374 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.78□□□□□ -1.32
CCDC38Q502W7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC38Q502W7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC38Q502W7 AC062022.1-201ENST00000451026 1684 ntBASIC6.77□□□□□ -1.32
CCDC38Q502W7 CASC19-228ENST00000641414 1684 ntBASIC6.77□□□□□ -1.32
CCDC38Q502W7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
CCDC38Q502W7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CCDC38Q502W7 AC022613.3-201ENST00000560740 1346 ntBASIC6.77□□□□□ -1.32
CCDC38Q502W7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 RN7SKP118-201ENST00000364331 330 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 RN7SKP189-201ENST00000365042 330 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 EEF1GP6-201ENST00000402309 905 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL451061.1-201ENST00000407887 862 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 RNA5SP115-201ENST00000411160 107 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC019070.1-201ENST00000415008 1024 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 RPL7AP14-201ENST00000424041 802 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC017019.1-201ENST00000426129 261 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 RPS19P6-201ENST00000441327 433 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL355355.1-201ENST00000442900 793 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 PFN1P11-201ENST00000445829 389 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 MGAT2P1-201ENST00000449718 797 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms