Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC078795.2-201ENST00000602835 1252 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AP000811.1-201ENST00000603803 651 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC011451.2-201ENST00000604303 598 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC063962.1-201ENST00000608199 521 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 VN1R7P-201ENST00000619242 903 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC018755.4-201ENST00000619715 454 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC005899.6-201ENST00000620729 297 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC106782.7-201ENST00000624024 418 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL359740.1-201ENST00000624340 592 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC133555.5-201ENST00000624430 418 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC091965.5-201ENST00000624785 342 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SOX4Q06945 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 AL590065.1-201ENST00000603371 4774 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SOX4Q06945 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC092451.3-201ENST00000625067 1343 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 MTND4LP21-201ENST00000415303 295 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 UQCRHP1-204ENST00000424609 274 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 GTF2IP3-201ENST00000433887 494 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 HMGN1P32-201ENST00000441744 256 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 MTCYBP3-201ENST00000445588 1137 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 GLRXP3-201ENST00000470810 321 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC010460.1-201ENST00000507087 466 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC027801.3-201ENST00000515049 698 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 SEC11B-201ENST00000518383 499 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC060788.1-201ENST00000521318 469 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 SETP17-201ENST00000534163 817 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC006518.2-201ENST00000542513 940 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.61□□□□□ -1.19
SOX4Q06945 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.61□□□□□ -1.19
SOX4Q06945 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 AL354943.1-201ENST00000572103 781 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC096708.2-201ENST00000577676 512 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX4Q06945 RPS27AP19-201ENST00000597285 458 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AC125494.3-201ENST00000602759 455 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AP001981.2-201ENST00000603241 418 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AL139286.2-201ENST00000606838 396 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms